RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ARIH2O95376 493 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 TNFAIP8O95379 198 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 AP2A1O95782 977 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PGK2P07205 417 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 FAM200BP0CF97 657 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ZNF286BP0CG31 522 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ZCCHC18P0CG32 403 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 COX4I1P13073 169 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ENO3P13929 434 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ITGAXP20702 1163 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 CYP3A5P20815 502 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 DNAJB1P25685 340 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 GNL1P36915 607 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 SERPINB5P36952 375 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 RGS2P41220 211 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 NPY2RP49146 381 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 HARS2P49590 506 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ERFP50548 548 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 TUBP50607 506 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 CHN2P52757 468 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 STX1BP61266 288 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 COL10A1Q03692 680 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ADIGQ0VDE8 80 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 CDH17Q12864 832 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PRKAA1Q13131 559 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 NME3Q13232 169 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 CYLC2Q14093 348 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PDE1CQ14123 709 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 FLOT2Q14254 428 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 FRG1Q14331 258 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 HERC3Q15034 1050 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PAFAH1B3Q15102 231 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PDK3Q15120 406 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ADRM1Q16186 407 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 LIN52Q52LA3 116 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 LRRC23Q53EV4 343 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 DCAF6Q58WW2 860 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 TCHHL1Q5QJ38 904 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 RNF220Q5VTB9 566 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 C1QL3Q5VWW1 255 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 LIPMQ5VYY2 423 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 TRNP1Q6NT89 227 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PMF1Q6P1K2 205 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 KLC3Q6P597 504 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ZYG11AQ6WRX3 759 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 SH2D5Q6ZV89 423 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ZNF534Q76KX8 674 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 DOK3Q7L591 496 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 KCNMB4Q86W47 210 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 SPATA24Q86W54 205 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PDSS2Q86YH6 399 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 TMEM126BQ8IUX1 230 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 DEFB106AQ8N104 65 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 CCDC185Q8N715 623 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 C12orf29Q8N999 325 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 OR6J1Q8NGC5 347 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 SLC35F5Q8WV83 523 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 NRG4Q8WWG1 115 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PYDC1Q8WXC3 89 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 STON2Q8WXE9 905 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 CCDC126Q96EE4 140 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 P2RY11Q96G91 374 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 DCUN1D1Q96GG9 259 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ATXN7L3BQ96GX2 97 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PIWIL1Q96J94 861 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 CLPTM1LQ96KA5 538 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 DCLRE1CQ96SD1 692 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 SYT15Q9BQS2 421 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 EBF4Q9BQW3 602 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ACE2Q9BYF1 805 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 MRPS26Q9BYN8 205 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 IL22Q9GZX6 179 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 UPF3AQ9H1J1 476 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 GBA3Q9H227 469 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 RNPEPQ9H4A4 650 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 UGT1A7Q9HAW7 530 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 UGT1A10Q9HAW8 530 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 UGT1A8Q9HAW9 530 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 NMRAL1Q9HBL8 299 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 EML4Q9HC35 981 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 SMYD2Q9NRG4 433 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 SETD4Q9NVD3 440 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 GTSE1Q9NYZ3 720 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 MOCS1Q9NZB8 636 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 TUBGCP4Q9UGJ1 667 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 IPO11Q9UI26 975 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 MSRAQ9UJ68 235 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 FZD10Q9ULW2 581 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 RAB26Q9ULW5 256 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PSMD13Q9UNM6 376 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 GINS2Q9Y248 185 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 RAP2CQ9Y3L5 183 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 HS3ST4Q9Y661 456 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 COL4A6Q14031 1691 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 MAP1BP46821 2468 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 RIF1Q5UIP0 2472 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ZFHX2Q9C0A1 2572 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 ACACBO00763 2458 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 PDCD11Q14690 1871 aaKnown RBP4.39□□□□□ -1.71
ATXN3-241ENST00000556374 A0A088AWK7 358 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms