RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CETN1Q12798 172 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 NME3Q13232 169 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 BIRC2Q13490 618 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 NR1D2Q14995 579 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 POLD3Q15054 466 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-239ENST00000556315 IRF4Q15306 451 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 WSCD2Q2TBF2 565 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 TMEM52BQ4KMG9 183 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 ZCWPW2Q504Y3 356 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 SPECC1LQ69YQ0 1117 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 DENND1BQ6P3S1 775 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 GDPD4Q6W3E5 623 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 KDELC2Q7Z4H8 507 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 C17orf82Q86X59 251 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-239ENST00000556315 NRSN1Q8IZ57 195 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 SLC34A3Q8N130 599 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 OR7D4Q8NG98 312 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 OR4D9Q8NGE8 314 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 KIAA1524Q8TCG1 905 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 HCAR2Q8TDS4 363 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 ZNF606Q8WXB4 792 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 ART4Q93070 314 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 MOCOSQ96EN8 888 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 KLHL32Q96NJ5 620 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 SORCS2Q96PQ0 1159 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 NUDT22Q9BRQ3 303 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 ZPBPQ9BS86 351 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 MENTQ9BUN1 341 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 TKTL2Q9H0I9 626 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 L2HGDHQ9H9P8 463 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 UPF2Q9HAU5 1272 aaKnown RBP4.83□□□□□ -1.64
ATXN3-239ENST00000556315 METTL14Q9HCE5 456 aaKnown RBP4.83□□□□□ -1.64
ATXN3-239ENST00000556315 CASS4Q9NQ75 786 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 OCIAD1Q9NX40 245 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 DONSONQ9NYP3 566 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 RRN3Q9NYV6 651 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 MPP6Q9NZW5 540 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 DKK3Q9UBP4 350 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 ST6GALNAC2Q9UJ37 374 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 ITM2BQ9Y287 266 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 TSC22D4Q9Y3Q8 395 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 DAAM1Q9Y4D1 1078 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 NBPF19A0A087WUL8 3843 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 IGLV3-10A0A075B6K4 115 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 B4DGG1 531 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 CACNB4O00305 520 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 INPP4BO15327 924 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 SLC16A3O15427 465 aaKnown RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 SRGAP2O75044 1071 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 GRAP2O75791 330 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 CD160O95971 181 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 F9P00740 461 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 KNG1P01042 644 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 FSHBP01225 129 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 CALCAP01258 141 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 FGF1P05230 155 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 RNF224P0DH78 156 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 NR1D1P20393 614 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 XPAP23025 273 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 GKP32189 559 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 STAT1P42224 750 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 FKBP3Q00688 224 aaKnown RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 MC2RQ01718 297 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 GCNT1Q02742 428 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 GNA12Q03113 381 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ITKQ08881 620 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ELP6Q0PNE2 266 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 PDCLQ13371 301 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 MTM1Q13496 603 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 PEX6Q13608 980 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ICAM4Q14773 271 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 MYBPC3Q14896 1274 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 EIF2S3LQ2VIR3 472 aaKnown RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 DCAF17Q5H9S7 520 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 BRMS1LQ5PSV4 323 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 C1QL3Q5VWW1 255 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 NKAIN2Q5VXU1 208 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 KANK2Q63ZY3 851 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ANKS6Q68DC2 871 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ATL3Q6DD88 541 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 TMEM71Q6P5X7 295 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 CEACAM20Q6UY09 585 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 C11orf57Q6ZUT1 292 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 RRAGAQ7L523 313 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 TIPARPQ7Z3E1 657 aaKnown RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 TFAP2DQ7Z6R9 452 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 CXorf67Q86X51 503 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 SFTPA2Q8IWL1 248 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ZNF683Q8IZ20 524 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 UNC5BQ8IZJ1 945 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 Q8N1X5 172 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ESX1Q8N693 406 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 CNTD1Q8N815 330 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 OR2AP1Q8NGE2 309 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 OR56A4Q8NGH8 313 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 OR6K2Q8NGY2 324 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 COG1Q8WTW3 980 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 OR1E3Q8WZA6 343 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 STARD8Q92502 1023 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ARHGEF2Q92974 986 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms