RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 C12orf65Q9H3J6 166 aaKnown RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 ABCB8Q9NUT2 735 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 LHX3Q9UBR4 397 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 VPS51Q9UID3 782 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 CHKBQ9Y259 395 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 RRP15Q9Y3B9 282 aaKnown RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 USH1CQ9Y6N9 552 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 NUP210Q8TEM1 1887 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 MYOFQ9NZM1 2061 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 ANKRD66B4E2M5 251 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 K7ESF4 209 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 CD3EAPO15446 510 aaKnown RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 DNAJA2O60884 412 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 H2AFYO75367 372 aaKnown RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 DCTN3O75935 186 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 IGSF6O95976 241 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 PROCP04070 461 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 CPA3P15088 417 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 SAT1P21673 171 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 LPOP22079 712 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 CCR2P41597 374 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 RGRP47804 291 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 NUMBP49757 651 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 CCR3P51677 355 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 PRKAA2P54646 552 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 EPHB1P54762 984 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 RAB10P61026 200 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 RPL26P61254 145 aaKnown RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 MPP1Q00013 466 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 ACVR1Q04771 509 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 SULT2A1Q06520 285 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 RAD51Q06609 339 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 BCL2L1Q07817 233 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 ASPHQ12797 758 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 LMAN2Q12907 356 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 CHI3L2Q15782 390 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 FASTKD1Q53R41 847 aaKnown RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 ARMC12Q5T9G4 340 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 TRPM8Q7Z2W7 1104 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 GLT6D1Q7Z4J2 308 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 PTAR1Q7Z6K3 402 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 CMC1Q7Z7K0 106 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 TBC1D1Q86TI0 1168 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 CRLF3Q8IUI8 442 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 SLC41A1Q8IVJ1 513 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 DENND6AQ8IWF6 608 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 APCDD1Q8J025 514 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 KIAA1958Q8N8K9 716 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 GBP7Q8N8V2 638 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 GPATCH11Q8N954 259 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 OR13J1Q8NGT2 312 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 GPR150Q8NGU9 434 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 OR4L1Q8NH43 312 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 TTC8Q8TAM2 541 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 PDCD6IPQ8WUM4 868 aaKnown RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 SMG7Q92540 1137 aaKnown RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 TCEAL4Q96EI5 215 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 SCYL1Q96KG9 808 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 EXOC2Q96KP1 924 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 DHRS1Q96LJ7 313 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 TBATAQ96M53 351 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 C7orf26Q96N11 449 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 CDC6Q99741 560 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 SLC2A11Q9BYW1 496 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 PLA2G2FQ9BZM2 168 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 NRSN2Q9GZP1 204 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 ACTR5Q9H9F9 607 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 CAB39LQ9H9S4 337 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 SLCO1B3Q9NPD5 702 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 CATSPERZQ9NTU4 200 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 THAP1Q9NVV9 213 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 NLE1Q9NVX2 485 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 C2orf42Q9NWW7 574 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 TMEM216Q9P0N5 145 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 SLC25A13Q9UJS0 675 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 CORO1CQ9ULV4 474 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 RPL26L1Q9UNX3 145 aaKnown RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 RUVBL2Q9Y230 463 aaKnown RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 MRPS23Q9Y3D9 190 aaKnown RBP6.77□□□□□ -1.33
SLIRP-204ENST00000555890 ACTL7AQ9Y615 435 aa6.77□□□□□ -1.33
SLIRP-204ENST00000555890 COL4A2P08572 1712 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 GON4LQ3T8J9 2241 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 A0A1W2PQ67 120 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 LNP1A1A4G5 178 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CCDC162PA2VCL2 907 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 TRABD2BA6NFA1 517 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CDX4O14627 284 aaPredicted RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 STX7O15400 261 aaKnown RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 SOCS5O75159 536 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 MOSPD3O75425 235 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 GJB3O75712 270 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 RGS9O75916 674 aaPredicted RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 HAUS5O94927 633 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 KLHL2O95198 593 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CD160O95971 181 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 GOT2P00505 430 aaKnown RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 PENKP01210 267 aaPredicted RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 SERPINE1P05121 402 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 MYL2P10916 166 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 RALBP11234 206 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms