RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ODF3L1Q8IXM7 274 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZBTB8BQ8NAP8 495 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 SMRP1Q8NCR6 262 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 RDM1Q8NG50 284 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 OR52I2Q8NH67 350 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 LYZL4Q96KX0 146 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 SPATA17Q96L03 361 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 PRMT6Q96LA8 375 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 EDEM3Q9BZQ6 932 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 GPR88Q9GZN0 384 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 GAREM1Q9H706 876 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 NOL11Q9H8H0 719 aaKnown RBP5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 EQTNQ9NQ60 294 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 GRIP1Q9Y3R0 1128 aa5.23□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZCWPW2A0A1B0GU75 182 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 URADA6NGE7 173 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 HNRNPCL2B2RXH8 293 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 TO15178 435 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 INSIG1O15503 277 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 BMP10O95393 424 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 LDLRP01130 860 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZNF23P17027 643 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 DNASE1P24855 282 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 MC5RP33032 325 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 MLLT10P55197 1068 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 DSCR9P59020 149 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 RELQ04864 619 aaPredicted RBP5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 KIF5AQ12840 1032 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 HSPB3Q12988 150 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 PLA2G7Q13093 441 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 COG2Q14746 738 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 SLC39A14Q15043 492 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 KRBOX4Q5JUW0 171 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 GCNT6Q5T4J0 391 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 C6orf163Q5TEZ5 329 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 FIGLAQ6QHK4 219 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 ASB18Q6ZVZ8 466 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 LILRB1Q8NHL6 650 aaPredicted RBP5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 ATL1Q8WXF7 558 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 MED30Q96HR3 178 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 FAM84BQ96KN1 310 aaPredicted RBP5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 FAM81BQ96LP2 452 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 RAB3IPQ96QF0 476 aaPredicted RBP5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZPBPQ9BS86 351 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 PFDN4Q9NQP4 134 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 SH3GLB2Q9NR46 395 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 SELENONQ9NZV5 590 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 KLHL9Q9P2J3 617 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 MALT1Q9UDY8 824 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 ANAPC5Q9UJX4 755 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 POU2F3Q9UKI9 436 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 OR2W1Q9Y3N9 320 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 NME7Q9Y5B8 376 aa5.22□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZNF587BE7ETH6 402 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 EIF3DO15371 548 aaKnown RBP eCLIP5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 SMAD6O43541 496 aaKnown RBP5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 WDR1O75083 606 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 MED24O75448 989 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 TADA2AO75478 443 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 HSPA4LO95757 839 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 T-ENOLP0DO92 83 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 SNHG28P0DPA3 235 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 ITGA2P17301 1181 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 ERCC2P18074 760 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 GABRA5P31644 462 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 PCGF2P35227 344 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 IL15P40933 162 aaPredicted RBP5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 ISL1P61371 349 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 CAMK2DQ13557 499 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 PTPRCAPQ14761 206 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 KIF19Q2TAC6 998 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 ARMC3Q5W041 872 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 OR7E24Q6IFN5 339 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 MAML2Q8IZL2 1156 aaPredicted RBP5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 MUC20Q8N307 709 aaPredicted RBP5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 GBGT1Q8N5D6 347 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 MOSPD2Q8NHP6 518 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 SMPDL3BQ92485 455 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 ZBTB9Q96C00 473 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 NXNL1Q96CM4 212 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 MTERF3Q96E29 417 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 NUP85Q9BW27 656 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 ANKRD2Q9GZV1 360 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 WNT5BQ9H1J7 359 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 FKRPQ9H9S5 495 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 SLC24A2Q9UI40 661 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 TUBE1Q9UJT0 475 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 DLGAP4Q9Y2H0 992 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 CGNL1Q0VF96 1302 aa5.21□□□□□ -1.58
CKS1BP1-201ENST00000555221 A0A0B4J293 547 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 ANKUB1A6NFN9 424 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 C4orf47A7E2U8 309 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 GPR137BO60478 399 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 LDB3O75112 727 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 NTN1O95631 604 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 SCG2P13521 617 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 GM2AP17900 193 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 MTHFRP42898 656 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 THBS3P49746 956 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms