RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 DMDP11532 3685 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 RALGAPA1Q6GYQ0 2036 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 EP300Q09472 2414 aaPredicted RBP16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 USP34Q70CQ2 3546 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 ZFHX2Q9C0A1 2572 aaPredicted RBP16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 SCAMP1O15126 338 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 KRT38O76015 456 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 TRIM16O95361 564 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 APOA4P06727 396 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 IDSP22304 550 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 AOAHP28039 575 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 POU4F1Q01851 419 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 TMED2Q15363 201 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 PLEKHS1Q5SXH7 462 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 LGSNQ5TDP6 509 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 AGAP9Q5VTM2 703 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 ADGRD1Q6QNK2 874 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 ASCL5Q7RTU5 278 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 OTOAQ7RTW8 1153 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 KANSL1Q7Z3B3 1105 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 TAF8Q7Z7C8 310 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 NRROSQ86YC3 692 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 TDRPQ86YL5 185 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 GPATCH11Q8N954 259 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 ELMO1Q92556 727 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 TSPAN17Q96FV3 270 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 EDEM2Q9BV94 578 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 ROPN1BQ9BZX4 212 aaPredicted RBP16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 DPEP2Q9H4A9 486 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 COG4Q9H9E3 785 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 ROPN1Q9HAT0 212 aaPredicted RBP16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 POPDC3Q9HBV1 291 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 TMEM9BQ9NQ34 198 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 MED16Q9Y2X0 877 aa16.14■□□□□ 0.18
SPTLC2-203ENST00000554901 TP53BP1Q12888 1972 aaPredicted RBP16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 CABIN1Q9Y6J0 2220 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 PIKFYVEQ9Y2I7 2098 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 FAM95CA0A1B0GW59 222 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 POC1B-GALNT4F8VUJ3 575 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 EIF3FO00303 357 aaPredicted RBP16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 NIPSNAP2O75323 286 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 KRT37O76014 449 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 ANXA6P08133 673 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 ITGA2BP08514 1039 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 SLC2A4P14672 509 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 H2AFXP16104 143 aaPredicted RBP16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 ATP5DP30049 168 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 CCR7P32248 378 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 ACTR1BP42025 376 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 ACTR1AP61163 376 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 INAVAQ3KP66 663 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 TTLL9Q3SXZ7 439 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 RBM20Q5T481 1227 aaKnown RBP16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 HECTD2Q5U5R9 776 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 CCDC91Q7Z6B0 441 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 NAT14Q8WUY8 206 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 DCAKDQ8WVC6 231 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 PHOX2BQ99453 314 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 DUSP23Q9BVJ7 150 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 IL21RQ9HBE5 538 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 DOLKQ9UPQ8 538 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 KCNK6Q9Y257 313 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 DHRS7Q9Y394 339 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 ST14Q9Y5Y6 855 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 FRYLO94915 3013 aa16.14■□□□□ 0.17
SPTLC2-203ENST00000554901 WDR87Q6ZQQ6 2873 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 RIF1Q5UIP0 2472 aaKnown RBP16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 SLC5A10A0PJK1 596 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 IQCF5A8MTL0 148 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 CDX4O14627 284 aaPredicted RBP16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 GPC4O75487 556 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 F7P08709 466 aaPredicted RBP16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 ALPPL2P10696 532 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 FDXRP22570 491 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 PBLDP30039 288 aaPredicted RBP16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 CLCN7P51798 805 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 SLC12A2P55011 1212 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 BNIP3Q12983 259 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 DNAJC3Q13217 504 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 C1orf61Q13536 156 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 GBX1Q14549 363 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 PLA2G4EQ3MJ16 856 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 AASDHQ4L235 1098 aaPredicted RBP16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 SYTL3Q4VX76 610 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 ABRAXAS1Q6UWZ7 409 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 DBX2Q6ZNG2 339 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 CFAP206Q8IYR0 622 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 KRT222Q8N1A0 295 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 SLC25A45Q8N413 288 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 RIBC1Q8N443 379 aaPredicted RBP16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 ZBTB2Q8N680 514 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 CCL4L1Q8NHW4 92 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 LKAAEAR1Q8TD35 194 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 INPP5DQ92835 1189 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 GLMNQ92990 594 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 TMEM159Q96B96 161 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 MTBPQ96DY7 904 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 ATXN7L3BQ96GX2 97 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 ELMO2Q96JJ3 720 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 NDNQ99608 321 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms