RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CCDC71Q8IV32 467 aaPredicted RBP3.4□□□□□ -1.87
SEC23A-207ENST00000554615 SFRP1Q8N474 314 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 ARHGEF39Q8N4T4 335 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 MGARPQ8TDB4 240 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 KCTD4Q8WVF5 259 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 MARVELD3Q96A59 401 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 ZBTB10Q96DT7 871 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 MYO19Q96H55 970 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 TEX37Q96LM6 180 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 MED18Q9BUE0 208 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 CDCA4Q9BXL8 241 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 DHX35Q9H5Z1 703 aaKnown RBP3.4□□□□□ -1.87
SEC23A-207ENST00000554615 COQ10BQ9H8M1 238 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 EVA1AQ9H8M9 152 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 AGO3Q9H9G7 860 aaKnown RBP3.4□□□□□ -1.87
SEC23A-207ENST00000554615 MLXIPLQ9NP71 852 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 RSL24D1Q9UHA3 163 aaKnown RBP3.4□□□□□ -1.87
SEC23A-207ENST00000554615 PCSK1NQ9UHG2 260 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 ST3GAL5Q9UNP4 418 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 MAPRE3Q9UPY8 281 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 USTQ9Y2C2 406 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 AK5Q9Y6K8 562 aa3.4□□□□□ -1.87
SEC23A-207ENST00000554615 A0A0G2JND7 137 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CCDC78A2IDD5 438 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 OR2A25A4D2G3 310 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 GOLGA8SH3BPF8 625 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 INO80B-WBP1J3KQ70 363 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CIB2O75838 187 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 THP07101 528 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SRPRAP08240 638 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 IDUAP35475 653 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 MLH1P40692 756 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CCR3P51677 355 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PNLIPRP1P54315 467 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 MLLT10P55197 1068 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 USP4Q13107 963 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 FZD5Q13467 585 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PRPSAP1Q14558 356 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 E2F5Q15329 346 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 DLG2Q15700 870 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CTU2Q2VPK5 515 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 GAB4Q2WGN9 574 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CRB2Q5IJ48 1285 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 COLEC12Q5KU26 742 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 RARS2Q5T160 578 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 RASIP1Q5U651 963 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 NEPROQ6NW34 567 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 RSPO2Q6UXX9 243 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 OTOP3Q7RTS5 596 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CYP2U1Q7Z449 544 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ARHGAP22Q7Z5H3 698 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SNX32Q86XE0 403 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ZCCHC7Q8N3Z6 543 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SMYD1Q8NB12 490 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 FAR1Q8WVX9 515 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 FBXL8Q96CD0 374 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PGBD4Q96DM1 585 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 HMCESQ96FZ2 354 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SAMD11Q96NU1 681 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 NEURL2Q9BR09 285 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ZBED2Q9BTP6 218 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF717Q9BY31 904 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SLIRPQ9GZT3 109 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 RHBGQ9H310 441 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CRISPLD1Q9H336 500 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 POMKQ9H5K3 350 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ACSS2Q9NR19 701 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 HOMER2Q9NSB8 354 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 DNAJC17Q9NVM6 304 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 EPS15L1Q9UBC2 864 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 EIF3LQ9Y262 564 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SPO11Q9Y5K1 396 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 KMT2EQ8IZD2 1858 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 A0A075B6Q4 140 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 MTMR11A4FU01 709 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 C5orf67F2Z3F1 127 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 GOLGA8MH3BSY2 632 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PSMD11O00231 422 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 HUS1O60921 280 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TNFRSF21O75509 655 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TPPPO94811 219 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TBX6O95947 436 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 RAP2AP10114 183 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 DESP17661 470 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 MAP3K8P41279 467 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TRPC1P48995 793 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PRMT2P55345 433 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 HTRA4P83105 476 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 DMPKQ09013 629 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 IFRD2Q12894 506 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 DSG2Q14126 1118 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 USP10Q14694 798 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 COL19A1Q14993 1142 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 GPR33Q49SQ1 333 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PAGE3Q5JUK9 113 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PLEKHS1Q5SXH7 462 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 NIPAL1Q6NVV3 410 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PRSS55Q6UWB4 352 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CBLL1Q75N03 491 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SPATA24Q86W54 205 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms