RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CSNK1DP48730 415 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 MEOX1P50221 254 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 EPHB1P54762 984 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 RHOAP61586 193 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 ST8SIA6P61647 398 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 ZXDAP98168 799 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 NSUN2Q08J23 767 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 TRADDQ15628 312 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 PARP6Q2NL67 630 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 HNRNPA1L2Q32P51 320 aaKnown RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 ACCSLQ4AC99 568 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 GLE1Q53GS7 698 aaKnown RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 CARD16Q5EG05 197 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 C9orf64Q5T6V5 341 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 RNASEH2BQ5TBB1 312 aaKnown RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 MBNL2Q5VZF2 373 aaKnown RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 KCTD11Q693B1 232 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 ITPRIPL1Q6GPH6 555 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 NCEH1Q6PIU2 408 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 KDELC1Q6UW63 502 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 SERPINA13PQ6UXR4 307 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 C4orf22Q6V702 233 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 ZNF852Q6ZMS4 543 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 DPY19L3Q6ZPD9 716 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 ARHGEF18Q6ZSZ5 1173 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 SRLQ86TD4 932 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 PRPF39Q86UA1 669 aaKnown RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 ZBTB46Q86UZ6 589 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 UNC5BQ8IZJ1 945 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 BBS5Q8N3I7 341 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 GLB1L3Q8NCI6 653 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 OR2A12Q8NGT7 310 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 OR6K2Q8NGY2 324 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 GFM2Q969S9 779 aaKnown RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 EXOC4Q96A65 974 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 IMP4Q96G21 291 aaKnown RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 FCRL5Q96RD9 977 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 NUDCD1Q96RS6 583 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 RBM15Q96T37 977 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 SEMA3CQ99985 751 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 RHOXF2Q9BQY4 288 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 ERP44Q9BS26 406 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 MLPHQ9BV36 600 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 TRIM31Q9BZY9 425 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 SLC25A51Q9H1U9 297 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 EPC1Q9H2F5 836 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 TBC1D17Q9HA65 648 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 NOD2Q9HC29 1040 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 DMRT3Q9NQL9 472 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 GRHL1Q9NZI5 618 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 ASIC3Q9UHC3 531 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 RSPH14Q9UHP6 348 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 NDRG2Q9UN36 371 aaKnown RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 PLA2G4CQ9UP65 541 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 SNX24Q9Y343 169 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 TTLL3Q9Y4R7 772 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 STON1Q9Y6Q2 735 aa6.32□□□□□ -1.4
SCFD1-212ENST00000554486 V9GYY5 206 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-212ENST00000554486 ZDBF2Q9HCK1 2354 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 MYLKQ15746 1914 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 EDDM13A0A1B0GTR0 161 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 TCRBV7S3A2A0A539 114 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 KANSL1LA0AUZ9 987 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 DNALI1O14645 258 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 NPC1O15118 1278 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 NRP2O60462 931 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 NDUFS2O75306 463 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 PMPCBO75439 489 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 NEBLO76041 1014 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 TMEM63AO94886 807 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 SEC31AO94979 1220 aaKnown RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 FSBPO95073 299 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 KLF8O95600 359 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 POP4O95707 220 aaKnown RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 IGSF6O95976 241 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 CTSLP07711 333 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 ADRB1P08588 477 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 CTSSP25774 331 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 ADRA1AP35348 466 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 ACTN2P35609 894 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 NNMTP40261 264 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 MAGEA6P43360 314 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 CCNHP51946 323 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 TERF1P54274 439 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 DRG2P55039 364 aaKnown RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 WNT3AP56704 352 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 SNRPD1P62314 119 aaKnown RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 MRPS21P82921 87 aaKnown RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 GUCY2DQ02846 1103 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 TRAF2Q12933 501 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 PIN1Q13526 163 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 SEMA5AQ13591 1074 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 KCNJ11Q14654 390 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 UBXN2BQ14CS0 331 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 ACAP2Q15057 778 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 MYLK3Q32MK0 819 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 FBXO43Q4G163 708 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 ZMAT1Q5H9K5 638 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms