RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 E9PAM4 449 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 MGEA5O60502 916 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 CCNCP24863 283 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 GRIK1P39086 918 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 EIF2DP41214 584 aaKnown RBP16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 SERPINH1P50454 418 aaKnown RBP16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 NCS1P62166 190 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 LAPTM5Q13571 262 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 ZDHHC13Q8IUH4 622 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 LRRC49Q8IUZ0 686 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 POC5Q8NA72 575 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 PHF10Q8WUB8 498 aaKnown RBP16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 SMARCD1Q96GM5 515 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 RNF38Q9H0F5 515 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 POLG2Q9UHN1 485 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 PDCD11Q14690 1871 aaKnown RBP16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 SUPT3HB4E1H0 165 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 CRCPO75575 148 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 ENO2P09104 434 aaPredicted RBP16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 CDH1P12830 882 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 E2F2Q14209 437 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 DDR2Q16832 855 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 DSN1Q9H410 356 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 MARCH7Q9H992 704 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 SARS2Q9NP81 518 aaKnown RBP16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 UTS2RQ9UKP6 389 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 G3V2T6 193 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 SCAMP3O14828 347 aaKnown RBP16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 UPK1BO75841 260 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 S1PR4O95977 384 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 THP07101 528 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 LBPP18428 481 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 MTHFRP42898 656 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 EEFSECP57772 596 aaKnown RBP16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 COQ5Q5HYK3 327 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 RAB41Q5JT25 222 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 KIAA0930Q6ICG6 404 aaPredicted RBP16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 LIMS2Q7Z4I7 341 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 TLK2Q86UE8 772 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 LACC1Q8IV20 430 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 MYEOVQ96EZ4 313 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 PPM1MQ96MI6 270 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 YME1L1Q96TA2 773 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 SMOC2Q9H3U7 446 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 TBC1D14Q9P2M4 693 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 AASSQ9UDR5 926 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 RGS17Q9UGC6 210 aaPredicted RBP16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 A0A1W2PQH9 124 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 ARL5CA6NH57 179 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 M0QX08 132 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 AP3B1O00203 1094 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 CDC7O00311 574 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 IRAK2O43187 625 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 XPNPEP2O43895 674 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 PRSS23O95084 383 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 SPNP16150 400 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 MAGP20916 626 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 CXCR2P25025 360 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 FMO4P31512 558 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 CASP3P42574 277 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 HCAR3P49019 387 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 KCNK10P57789 538 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 PHC1P78364 1004 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 KCNAB2Q13303 367 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 FSCN1Q16658 493 aaKnown RBP16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 C18orf21Q32NC0 220 aaPredicted RBP16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 SIRPB2Q5JXA9 342 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 UBE2UQ5VVX9 321 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 PROSER1Q86XN7 944 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 RORBQ92753 470 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 C17orf80Q9BSJ5 609 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 AGO3Q9H9G7 860 aaKnown RBP16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 ENTPD7Q9NQZ7 604 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 ABI2Q9NYB9 513 aaPredicted RBP16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 FLRT1Q9NZU1 646 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 NAALAD2Q9Y3Q0 740 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 PRRC2BQ5JSZ5 2229 aaKnown RBP16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 RALGAPA2Q2PPJ7 1873 aa16.71■□□□□ 0.27
PPP4R3A-202ENST00000554390 SYCE1LA8MT33 242 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 TBX1O43435 398 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 GOT2P00505 430 aaKnown RBP16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 HTR1EP28566 365 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 MTPNP58546 118 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 TOP3AQ13472 1001 aaPredicted RBP16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 TSNQ15631 228 aaKnown RBP16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 PIK3R6Q5UE93 754 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 NEK10Q6ZWH5 1172 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 HEATR4Q86WZ0 1026 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 TP53INP1Q96A56 240 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 ITCHQ96J02 903 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 EMILIN2Q9BXX0 1053 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 DKK3Q9UBP4 350 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 ST3GAL5Q9UNP4 418 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 KCNH4Q9UQ05 1017 aa16.71■□□□□ 0.26
PPP4R3A-202ENST00000554390 NYNRINQ9P2P1 1898 aaKnown RBP16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 MUSKO15146 869 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 F9P00740 461 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 CHRNB1P11230 501 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 MTHFD2P13995 350 aa16.7■□□□□ 0.26
PPP4R3A-202ENST00000554390 DNAJB2P25686 324 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms