RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 MED16Q9Y2X0 877 aa16.94■□□□□ 0.3
TUBB3-205ENST00000554336 UBA6A0AVT1 1052 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-205ENST00000554336 IQCF5A8MTL0 148 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 CFAP99D6REC4 459 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 H3BM21 787 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 PRMT5O14744 637 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-205ENST00000554336 AQP9O43315 295 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 NDUFS3O75489 264 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 SPAG6O75602 509 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 TNFP01375 233 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 RALBP11234 206 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 RPS3P23396 243 aaKnown RBP eCLIP16.93■□□□□ 0.35e-8■■□□□ 13.9
TUBB3-205ENST00000554336 LEPRP48357 1165 aaKnown RBP16.93■□□□□ 0.3
TUBB3-205ENST00000554336 BLKP51451 505 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 PMS2P54278 862 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 EIF3BP55884 814 aaKnown RBP16.93■□□□□ 0.3
TUBB3-205ENST00000554336 GTF2H3Q13889 308 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 UAP1Q16222 522 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-205ENST00000554336 ZNF449Q6P9G9 518 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 DBX2Q6ZNG2 339 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 FAM83HQ6ZRV2 1179 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-205ENST00000554336 CYS1Q717R9 158 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 SDCCAG8Q86SQ7 713 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-205ENST00000554336 LILRA3Q8N6C8 439 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-205ENST00000554336 LMX1AQ8TE12 382 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 HEXDCQ8WVB3 486 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 ZFATQ9P243 1243 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 RABGEF1Q9UJ41 708 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 GPR34Q9UPC5 381 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 APOBEC2Q9Y235 224 aaKnown RBP16.93■□□□□ 0.3
TUBB3-205ENST00000554336 KCNK6Q9Y257 313 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 GPSM3Q9Y4H4 160 aa16.93■□□□□ 0.3
TUBB3-205ENST00000554336 KMOO15229 486 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 RIPK2O43353 540 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 PCDHGA12O60330 932 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 DFNA5O60443 496 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 NIPSNAP2O75323 286 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 POP7O75817 140 aaKnown RBP16.92■□□□□ 0.3
TUBB3-205ENST00000554336 AP2A2O94973 939 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 EML2O95834 649 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 AHSGP02765 367 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 ZNF7P17097 686 aaPredicted RBP16.92■□□□□ 0.3
TUBB3-205ENST00000554336 PBLDP30039 288 aaPredicted RBP16.92■□□□□ 0.3
TUBB3-205ENST00000554336 ADARP55265 1226 aaKnown RBP16.92■□□□□ 0.3
TUBB3-205ENST00000554336 RBM20Q5T481 1227 aaKnown RBP16.92■□□□□ 0.3
TUBB3-205ENST00000554336 RNF187Q5TA31 235 aaPredicted RBP16.92■□□□□ 0.3
TUBB3-205ENST00000554336 KIAA0408Q6ZU52 694 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 GALNT7Q86SF2 657 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 PROSER1Q86XN7 944 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 KRT222Q8N1A0 295 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 UHMK1Q8TAS1 419 aaKnown RBP16.92■□□□□ 0.3
TUBB3-205ENST00000554336 RHBDD1Q8TEB9 315 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 SCG3Q8WXD2 468 aaKnown RBP16.92■□□□□ 0.3
TUBB3-205ENST00000554336 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.92■□□□□ 0.3
TUBB3-205ENST00000554336 LINC00615Q96LM1 132 aaPredicted RBP16.92■□□□□ 0.3
TUBB3-205ENST00000554336 TIMM29Q9BSF4 260 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 SPASTQ9UBP0 616 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 ADAMTS20P59510 1910 aa16.92■□□□□ 0.3
TUBB3-205ENST00000554336 COL5A1P20908 1838 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-205ENST00000554336 A6NCN8 305 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 FLRT2O43155 660 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 CTSEP14091 401 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 FMO4P31512 558 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 STX2P32856 288 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 TIAL1Q01085 375 aaKnown RBP eCLIP16.91■□□□□ 0.3
TUBB3-205ENST00000554336 LRP8Q14114 963 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 NFE2L1Q14494 772 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 INSCQ1MX18 579 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 SLC30A9Q6PML9 568 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 NAPRTQ6XQN6 538 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 TRMT10CQ7L0Y3 403 aaKnown RBP16.91■□□□□ 0.3
TUBB3-205ENST00000554336 MARCH9Q86YJ5 346 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 ACVR1CQ8NER5 493 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 ZNF514Q96K75 400 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-205ENST00000554336 NDNQ99608 321 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 TTC1Q99614 292 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 ACSS3Q9H6R3 686 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 KLC4Q9NSK0 619 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 GALPQ9UBC7 116 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 FAM8A1Q9UBU6 413 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 LHX6Q9UPM6 363 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 DNAJC16Q9Y2G8 782 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 PCDHGB2Q9Y5G2 931 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 NBEAQ8NFP9 2946 aa16.91■□□□□ 0.3
TUBB3-205ENST00000554336 GOLGA4Q13439 2230 aaKnown RBP16.9■□□□□ 0.3
TUBB3-205ENST00000554336 CELSR3Q9NYQ7 3312 aa16.9■□□□□ 0.3
TUBB3-205ENST00000554336 LMO7DNF2Z398 122 aa16.9■□□□□ 0.3
TUBB3-205ENST00000554336 TRIM38O00635 465 aa16.9■□□□□ 0.3
TUBB3-205ENST00000554336 YY2O15391 372 aa16.9■□□□□ 0.3
TUBB3-205ENST00000554336 YKT6O15498 198 aa16.9■□□□□ 0.3
TUBB3-205ENST00000554336 FFAR2O15552 330 aa16.9■□□□□ 0.3
TUBB3-205ENST00000554336 CTIFO43310 598 aaKnown RBP16.9■□□□□ 0.3
TUBB3-205ENST00000554336 FAM155BO75949 473 aa16.9■□□□□ 0.3
TUBB3-205ENST00000554336 ABHD2P08910 425 aa16.9■□□□□ 0.3
TUBB3-205ENST00000554336 PKMP14618 531 aaKnown RBP16.9■□□□□ 0.3
TUBB3-205ENST00000554336 ITGB6P18564 788 aa16.9■□□□□ 0.3
TUBB3-205ENST00000554336 PPARGP37231 505 aaPredicted RBP16.9■□□□□ 0.3
TUBB3-205ENST00000554336 ACTR1BP42025 376 aa16.9■□□□□ 0.3
TUBB3-205ENST00000554336 PGGT1BP53609 377 aa16.9■□□□□ 0.3
TUBB3-205ENST00000554336 ACTR1AP61163 376 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms