RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 TM9SF1O15321 606 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 PHGDHO43175 533 aaKnown RBP14.26□□□□□ -0.13
SHMT2-210ENST00000553950 C2P06681 752 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 F7P08709 466 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-210ENST00000553950 LTA4HP09960 611 aaKnown RBP14.26□□□□□ -0.13
SHMT2-210ENST00000553950 SLC35E2BP0CK96 405 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 PYGBP11216 843 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 AOAHP28039 575 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 CSRP3P50461 194 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 SRP54P61011 504 aaKnown RBP14.26□□□□□ -0.13
SHMT2-210ENST00000553950 MAGOHP61326 146 aaKnown RBP14.26□□□□□ -0.13
SHMT2-210ENST00000553950 PPARDQ03181 441 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 ARMCX6Q7L4S7 300 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 SYT12Q8IV01 421 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 CYP4X1Q8N118 509 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 DEFB119Q8N690 84 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 PDXPQ96GD0 296 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 DERL2Q9GZP9 239 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 DPEP2Q9H4A9 486 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 CARS2Q9HA77 564 aaKnown RBP14.26□□□□□ -0.13
SHMT2-210ENST00000553950 NMRAL1Q9HBL8 299 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 ZNHIT2Q9UHR6 403 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 MOSPD1Q9UJG1 213 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 SUFUQ9UMX1 484 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 CA5BQ9Y2D0 317 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 TMEM98Q9Y2Y6 226 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 TLR4O00206 839 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 YKT6O15498 198 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 PRPF4O43172 522 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 HRO43593 1189 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 SGTAO43765 313 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 KLHL2O95198 593 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 ZWINTO95229 277 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 WISP3O95389 354 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 SYF2O95926 243 aaKnown RBP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 TNFP01375 233 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 MPC1LP0DKB6 136 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 BRAFP15056 766 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 PBLDP30039 288 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 CRHR1P34998 444 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 GNPDA1P46926 289 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 CLCNKAP51800 687 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 SLC18A1P54219 525 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 NXPH1P58417 271 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 ARHGAP8P85298 464 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 SLC18A2Q05940 514 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 ILF3Q12906 894 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 SP140Q13342 867 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 SEPT7Q16181 437 aaKnown RBP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 PYCR3Q53H96 274 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 TTMPQ5BVD1 217 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 ZNF648Q5T619 568 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 PRR23BQ6ZRT6 265 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 ADAMTSL2Q86TH1 951 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 PIM3Q86V86 326 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 ZNF547Q8IVP9 402 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 CEP97Q8IW35 865 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 KRT222Q8N1A0 295 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 SLC22A18ASQ8N1D0 253 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 SDR16C5Q8N3Y7 309 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 BEND7Q8N7W2 519 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 SIDT2Q8NBJ9 832 aaKnown RBP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 C1orf216Q8TAB5 229 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 CCDC97Q96F63 343 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 LINGO1Q96FE5 620 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 PDLIM5Q96HC4 596 aaKnown RBP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 FOPNLQ96NB1 174 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 GSDMCQ9BYG8 508 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 SLC13A1Q9BZW2 595 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 CNOT10Q9H9A5 744 aaKnown RBP14.25□□□□□ -0.13
SHMT2-210ENST00000553950 COG4Q9H9E3 785 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 ERVMER34-1Q9H9K5 563 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 CYP4F12Q9HCS2 524 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 NKIRAS1Q9NYS0 192 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 PILRBQ9UKJ0 227 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 ACSL5Q9ULC5 683 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 GRID1Q9ULK0 1009 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 MED16Q9Y2X0 877 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 PCDHGA5Q9Y5G8 931 aa14.25□□□□□ -0.13
SHMT2-210ENST00000553950 A0A1W2PPM1 405 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 IQCF5A8MTL0 148 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 POP7O75817 140 aaKnown RBP14.24□□□□□ -0.13
SHMT2-210ENST00000553950 RPN2P04844 631 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 SLC35G4P0C7Q5 338 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 CCDC166P0CW27 439 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 SLC2A4P14672 509 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 ITGB6P18564 788 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 ITPKAP23677 461 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 CCR7P32248 378 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 HK3P52790 923 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 SRSF5Q13243 272 aaKnown RBP14.24□□□□□ -0.13
SHMT2-210ENST00000553950 GBX1Q14549 363 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 ALG11Q2TAA5 492 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 CCDC153Q494R4 210 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 KCTD16Q68DU8 428 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 PAQR3Q6TCH7 311 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 CLEC14AQ86T13 490 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 EXOC3L1Q86VI1 746 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 CPNE9Q8IYJ1 553 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 PHACTR4Q8IZ21 702 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms