RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 QSOX1O00391 747 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 NDC80O14777 642 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 VIPP01282 170 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 RPLP0P05388 317 aaKnown RBP8.21□□□□□ -1.1
PSEN1-209ENST00000553855 PNLIPP16233 465 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 PAMP19021 973 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 CLCNKAP51800 687 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 ZNF140P52738 457 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-209ENST00000553855 TERF1P54274 439 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 SESN2P58004 480 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-209ENST00000553855 PLAURQ03405 335 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 CACNG1Q06432 222 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 KIR2DS5Q14953 304 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 TRIP13Q15645 432 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-209ENST00000553855 PLA2G4EQ3MJ16 856 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 MAP9Q49MG5 647 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 FASTKD1Q53R41 847 aaKnown RBP8.21□□□□□ -1.1
PSEN1-209ENST00000553855 PCID2Q5JVF3 399 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 ZNF648Q5T619 568 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-209ENST00000553855 GPRC6AQ5T6X5 926 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 CASC4Q6P4E1 433 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 TMEM220Q6QAJ8 160 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 AFTPHQ6ULP2 937 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 UNQ6494/PRO21346Q6UXR6 183 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 PCGF5Q86SE9 256 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 AMZ2Q86W34 360 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 CACTIN-AS1Q8N1I8 211 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 OTUD6BQ8N6M0 293 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 BEND7Q8N7W2 519 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-209ENST00000553855 OR6P1Q8NGX9 317 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 GABPB2Q8TAK5 448 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-209ENST00000553855 COG1Q8WTW3 980 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 NXPE2Q96DL1 559 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 SEC16BQ96JE7 1060 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 DNAJC1Q96KC8 554 aaKnown RBP8.21□□□□□ -1.1
PSEN1-209ENST00000553855 CAPZA3Q96KX2 299 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 RANBP9Q96S59 729 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 SLC38A3Q99624 504 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 TSSK1BQ9BXA7 367 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 STRADBQ9C0K7 418 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 IL22Q9GZX6 179 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 SPATS2LQ9NUQ6 558 aaKnown RBP8.21□□□□□ -1.1
PSEN1-209ENST00000553855 SMOXQ9NWM0 555 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 PIH1D1Q9NWS0 290 aaKnown RBP8.21□□□□□ -1.1
PSEN1-209ENST00000553855 ASIC3Q9UHC3 531 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 DNAJC16Q9Y2G8 782 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 KCTD3Q9Y597 815 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 TRBV23OR9-2A0A075B6M9 112 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CCDC78A2IDD5 438 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 FAM149AA5PLN7 773 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 FAM221BA6H8Z2 402 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 OR2AG2A6NM03 316 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 H7C0S8 307 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CCDC188H7C350 402 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 TERTO14746 1132 aaKnown RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CHUKO15111 745 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 ZNF185O15231 689 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 LDB2O43679 373 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 NOBOXO60393 691 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 FBXO24O75426 580 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 POP7O75817 140 aaKnown RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 WFS1O76024 890 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 TOP3BO95985 862 aaKnown RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 FUCA1P04066 466 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 F3P13726 295 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 ACPPP15309 386 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 TPSB2P20231 275 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 ALDH4A1P30038 563 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 PBLDP30039 288 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 GPR3P46089 330 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 MAZP56270 477 aaKnown RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 INSM1Q01101 510 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 HHEXQ03014 270 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 TARDBPQ13148 414 aaKnown RBP eCLIP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 KRT33BQ14525 404 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 HLTFQ14527 1009 aaKnown RBP eCLIP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 PTPRCAPQ14761 206 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 TPSAB1Q15661 275 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CYP1B1Q16678 543 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CLPPQ16740 277 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 AMZ1Q400G9 498 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CCDC38Q502W7 563 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 PERM1Q5SV97 790 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 FNBP1LQ5T0N5 605 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CERCAMQ5T4B2 595 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 TSTD2Q5T7W7 516 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 PAPD7Q5XG87 772 aaKnown RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 KCTD16Q68DU8 428 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 LRRC8BQ6P9F7 803 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CERS6Q6ZMG9 384 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CCNI2Q6ZMN8 369 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 SYDE1Q6ZW31 735 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 DET1Q7L5Y6 550 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 PRUNE1Q86TP1 453 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 NRROSQ86YC3 692 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 LSMEM2Q8N112 164 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 NXPE1Q8N323 547 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 ARL14Q8N4G2 192 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 OR10G6Q8NH81 332 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 PEX13Q92968 403 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms