RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 PSMD14O00487 310 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 MITFO75030 526 aaPredicted RBP3.05□□□□□ -1.92
VRK1-202ENST00000553683 ZBED4O75132 1171 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 CSPG5O95196 566 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 TSHBP01222 138 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 APOHP02749 345 aaPredicted RBP3.05□□□□□ -1.92
VRK1-202ENST00000553683 RB1P06400 928 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 PATE4P0C8F1 98 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 ITGA3P26006 1051 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 NAP1L1P55209 391 aaKnown RBP3.05□□□□□ -1.92
VRK1-202ENST00000553683 HILS1P60008 231 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 UBE2V1Q13404 147 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 KCNC3Q14003 757 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 ARHGAP11AQ6P4F7 1023 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 RBMS3Q6XE24 437 aaKnown RBP3.05□□□□□ -1.92
VRK1-202ENST00000553683 C4orf50Q6ZRC1 276 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 DGLUCYQ7Z3D6 616 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 MAATS1Q7Z4T9 603 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 PLD3Q8IV08 490 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 WDTC1Q8N5D0 677 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 ANKRD52Q8NB46 1076 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 PAPD5Q8NDF8 572 aaKnown RBP3.05□□□□□ -1.92
VRK1-202ENST00000553683 OR2T12Q8NG77 320 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 FCAMRQ8WWV6 532 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 SKA1Q96BD8 255 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 OXNAD1Q96HP4 312 aaPredicted RBP3.05□□□□□ -1.92
VRK1-202ENST00000553683 PRMT6Q96LA8 375 aaPredicted RBP3.05□□□□□ -1.92
VRK1-202ENST00000553683 SMC6Q96SB8 1091 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 SYNCQ9H7C4 482 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 ECHDC1Q9NTX5 307 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 NME7Q9Y5B8 376 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 KIAA1210Q9ULL0 1709 aa3.05□□□□□ -1.92
VRK1-202ENST00000553683 A0A1W2PR77 199 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 MED19A0JLT2 244 aaPredicted RBP3.04□□□□□ -1.92
VRK1-202ENST00000553683 LRRC72A6NJI9 287 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 H3BQ06 376 aaPredicted RBP3.04□□□□□ -1.92
VRK1-202ENST00000553683 CLIC2O15247 247 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 PTP4A3O75365 173 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 TPPPO94811 219 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 IGLV1-44P01699 117 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 NR3C1P04150 777 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 SERPINB2P05120 415 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 FAM157CP0CG43 387 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 PRLRP16471 622 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 CAPN3P20807 821 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 CHRNB4P30926 498 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 GNB1P62873 340 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 ITGA9Q13797 1035 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 KIAA1644Q3SXP7 199 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 GCNT6Q5T4J0 391 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 KIAA0930Q6ICG6 404 aaPredicted RBP3.04□□□□□ -1.92
VRK1-202ENST00000553683 KLC3Q6P597 504 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 C1orf122Q6ZSJ8 110 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 TBC1D1Q86TI0 1168 aaPredicted RBP3.04□□□□□ -1.92
VRK1-202ENST00000553683 SCYL3Q8IZE3 742 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 TAS1R2Q8TE23 839 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 WBP1Q96G27 269 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 LRR1Q96L50 414 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 SGK494Q96LW2 274 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 TIGD1Q96MW7 591 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 MOV10L1Q9BXT6 1211 aaKnown RBP3.04□□□□□ -1.92
VRK1-202ENST00000553683 PITPNM3Q9BZ71 974 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 SMARCAD1Q9H4L7 1026 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 SEPT11Q9NVA2 429 aaKnown RBP3.04□□□□□ -1.92
VRK1-202ENST00000553683 DDX43Q9NXZ2 648 aaKnown RBP3.04□□□□□ -1.92
VRK1-202ENST00000553683 FLRT3Q9NZU0 649 aa3.04□□□□□ -1.92
VRK1-202ENST00000553683 SEC63Q9UGP8 760 aaKnown RBP3.04□□□□□ -1.92
VRK1-202ENST00000553683 ELOVL7A1L3X0 281 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 PLK4O00444 970 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 ZG16O60844 167 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 EML2O95834 649 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 CLPTM1O96005 669 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 GNB3P16520 340 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 GNAZP19086 355 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 TNFAIP3P21580 790 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 CBLP22681 906 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 EPHA2P29317 976 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 ARSEP51690 589 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 CLNS1AP54105 237 aaKnown RBP3.03□□□□□ -1.92
VRK1-202ENST00000553683 RPS18P62269 152 aaKnown RBP3.03□□□□□ -1.92
VRK1-202ENST00000553683 CXCL9Q07325 125 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 NR1D2Q14995 579 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 RAB41Q5JT25 222 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 CCDC30Q5VVM6 783 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 ADALQ6DHV7 355 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 FAM180BQ6P0A1 224 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 INTS8Q75QN2 995 aaKnown RBP3.03□□□□□ -1.92
VRK1-202ENST00000553683 ANO5Q75V66 913 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 TTC39CQ8N584 583 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 ADAD2Q8NCV1 583 aaKnown RBP3.03□□□□□ -1.92
VRK1-202ENST00000553683 WDR20Q8TBZ3 569 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 HCAR2Q8TDS4 363 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 SLC47A1Q96FL8 570 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 GAD1Q99259 594 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 HGH1Q9BTY7 390 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 SEMA6AQ9H2E6 1030 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 BICC1Q9H694 974 aaKnown RBP3.03□□□□□ -1.92
VRK1-202ENST00000553683 HHATLQ9HCP6 504 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 PAG1Q9NWQ8 432 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 PSD3Q9NYI0 1048 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms