RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SEL1L2Q5TEA6 688 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 ZDHHC20Q5W0Z9 365 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 WASH2PQ6VEQ5 465 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 EXD3Q8N9H8 876 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 TTC13Q8NBP0 860 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 SH3KBP1Q96B97 665 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 C12orf66Q96MD2 445 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.83■□□□□ 0.44
SHMT2-206ENST00000553529 SPRY4Q9C004 299 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 WASH6PQ9NQA3 447 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 AKAP7Q9P0M2 348 aaPredicted RBP17.83■□□□□ 0.44
SHMT2-206ENST00000553529 PCDHGA3Q9Y5H0 932 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 AHCTF1Q8WYP5 2266 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 B4E171 279 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 ZW10O43264 779 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 RAD1O60671 282 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 CRTAMO95727 393 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 MTHFD1P11586 935 aaKnown RBP17.82■□□□□ 0.44
SHMT2-206ENST00000553529 PDHA2P29803 388 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 TSPAN7P41732 249 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 PREPP48147 710 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 MC2RQ01718 297 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 FOXM1Q08050 763 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 DBN1Q16643 649 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 ZNF658BQ4V348 819 aaPredicted RBP17.82■□□□□ 0.44
SHMT2-206ENST00000553529 ATP1A1-AS1Q5TC04 95 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 METRNLQ641Q3 311 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 SNX20Q7Z614 316 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 SERPINA9Q86WD7 417 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 SPNS2Q8IVW8 549 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 LRRC8AQ8IWT6 810 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 CFAP206Q8IYR0 622 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 RNF10Q8N5U6 811 aaKnown RBP17.82■□□□□ 0.44
SHMT2-206ENST00000553529 LRRC40Q9H9A6 602 aa17.82■□□□□ 0.44
SHMT2-206ENST00000553529 NLE1Q9NVX2 485 aaPredicted RBP17.82■□□□□ 0.44
SHMT2-206ENST00000553529 MRPS18BQ9Y676 258 aaKnown RBP17.82■□□□□ 0.44
SHMT2-206ENST00000553529 IGHV5-51A0A0C4DH38 117 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 LOC101059948A0A1B0GTJ6 334 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 CCDC162PA2VCL2 907 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 MGAT4DA6NG13 374 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 EIF4E1BA6NMX2 242 aaKnown RBP17.81■□□□□ 0.44
SHMT2-206ENST00000553529 STMND1H3BQB6 276 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 ERVH48-1M5A8F1 160 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 ARHGAP6O43182 974 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 PPFIA2O75334 1257 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 RASSF9O75901 435 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 ZIC2O95409 532 aaPredicted RBP17.81■□□□□ 0.44
SHMT2-206ENST00000553529 KCNJ1P48048 391 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 SEMA3AQ14563 771 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 LONRF2Q1L5Z9 754 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 BCL7AQ4VC05 210 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 DCAF12Q5T6F0 453 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 TAS2R42Q7RTR8 314 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 OR2L2Q8NH16 312 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 CDKN2AIPNLQ96HQ2 116 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 FERMT1Q9BQL6 677 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 DDA1Q9BW61 102 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 TLR10Q9BXR5 811 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 ZCCHC2Q9C0B9 1178 aaKnown RBP17.81■□□□□ 0.44
SHMT2-206ENST00000553529 UCK1Q9HA47 277 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 SMARCAL1Q9NZC9 954 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 IL17BQ9UHF5 180 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 PILRAQ9UKJ1 303 aa17.81■□□□□ 0.44
SHMT2-206ENST00000553529 TRBV5-4A0A0C4DH59 114 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.8■□□□□ 0.44
SHMT2-206ENST00000553529 VCLP18206 1134 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 ITGALP20701 1170 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 F8A1P23610 371 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 ACRV1P26436 265 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 RPL22P35268 128 aaKnown RBP17.8■□□□□ 0.44
SHMT2-206ENST00000553529 HALP42357 657 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 PRLHRP49683 370 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 CRADDP78560 199 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 NFKB2Q00653 900 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 BRD3Q15059 726 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 RPS6KA1Q15418 735 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 TMEM164Q5U3C3 297 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 CACHD1Q5VU97 1274 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 LDB1Q86U70 411 aaPredicted RBP17.8■□□□□ 0.44
SHMT2-206ENST00000553529 CACNA2D3Q8IZS8 1091 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 PHC3Q8NDX5 983 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 OR13J1Q8NGT2 312 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 OR6C1Q96RD1 312 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 COPS8Q99627 209 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 MAP3K3Q99759 626 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 DPYSL5Q9BPU6 564 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 TSGA10Q9BZW7 698 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 ZNF148Q9UQR1 794 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 ATRXP46100 2492 aa17.8■□□□□ 0.44
SHMT2-206ENST00000553529 IGLV3-16A0A075B6K0 115 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 MROH6A6NGR9 719 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 KRT86O43790 486 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 OR1I1O60431 355 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 STK17BO94768 372 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 F7P08709 466 aaPredicted RBP17.79■□□□□ 0.44
SHMT2-206ENST00000553529 FAM87AP0C7U9 286 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 ATP1B2P14415 290 aaPredicted RBP17.79■□□□□ 0.44
SHMT2-206ENST00000553529 FOLR1P15328 257 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 FOXN2P32314 431 aa17.79■□□□□ 0.44
SHMT2-206ENST00000553529 GSDMDP57764 484 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms