RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 TRIM55Q9BYV6 548 aa9.17□□□□□ -0.94
CHD8-203ENST00000553283 FGF21Q9NSA1 209 aa9.17□□□□□ -0.94
CHD8-203ENST00000553283 ZNHIT6Q9NWK9 470 aaKnown RBP9.17□□□□□ -0.94
CHD8-203ENST00000553283 HRASLS2Q9NWW9 162 aa9.17□□□□□ -0.94
CHD8-203ENST00000553283 PSMD13Q9UNM6 376 aa9.17□□□□□ -0.94
CHD8-203ENST00000553283 FARSAQ9Y285 508 aaKnown RBP9.17□□□□□ -0.94
CHD8-203ENST00000553283 RELNP78509 3460 aa9.17□□□□□ -0.94
CHD8-203ENST00000553283 UBA6A0AVT1 1052 aaPredicted RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 BLACEA4D250 179 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 OR5K3A6NET4 321 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 MGAT4DA6NG13 374 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 TLCD2A6NGC4 264 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 OR2AG2A6NM03 316 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 GAPDHSO14556 408 aaPredicted RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 BUD23O43709 281 aaKnown RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 CST8O60676 142 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 ZBTB11O95625 1053 aaPredicted RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 TPM3P06753 285 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 MTHFD1P11586 935 aaKnown RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 TNNT1P13805 278 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 CDKN2BP42772 138 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 CHRNA4P43681 627 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 TNNT3P45378 269 aaPredicted RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 TUBB4BP68371 445 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 PDE1BQ01064 536 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 LAMB3Q13751 1172 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 ITGA9Q13797 1035 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 TUBB2AQ13885 445 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 PLCL1Q15111 1095 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 TCEAL1Q15170 157 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 SLC1A5Q15758 541 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 TAZQ16635 292 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 LONRF2Q1L5Z9 754 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 FNBP1LQ5T0N5 605 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 ZNF517Q6ZMY9 492 aaPredicted RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 PID1Q7Z2X4 250 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 GLT6D1Q7Z4J2 308 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 SYVN1Q86TM6 617 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 CARFQ8N187 725 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 BEND7Q8N7W2 519 aaPredicted RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 OR8K5Q8NH50 307 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 ZNF398Q8TD17 642 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 BLOC1S5Q8TDH9 187 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 OXNAD1Q96HP4 312 aaPredicted RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 CCDC42Q96M95 316 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 INSM2Q96T92 566 aaPredicted RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 VAT1Q99536 393 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 CHP1Q99653 195 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 TUBB2BQ9BVA1 445 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 MLXIPLQ9NP71 852 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 KCND1Q9NSA2 647 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 IMP3Q9NV31 184 aaKnown RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 SMOXQ9NWM0 555 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 KLHL8Q9P2G9 620 aaPredicted RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 ACSL5Q9ULC5 683 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 PKP3Q9Y446 797 aa9.16□□□□□ -0.94
CHD8-203ENST00000553283 UTP20O75691 2785 aaKnown RBP9.16□□□□□ -0.94
CHD8-203ENST00000553283 KLHL33A6NCF5 533 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 OR6C74A6NCV1 312 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 STX7O15400 261 aaKnown RBP9.15□□□□□ -0.94
CHD8-203ENST00000553283 GPR39O43194 453 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 CPNE3O75131 537 aaKnown RBP9.15□□□□□ -0.94
CHD8-203ENST00000553283 VPS4BO75351 444 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 SCRG1O75711 98 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 KLK3P07288 261 aaPredicted RBP9.15□□□□□ -0.94
CHD8-203ENST00000553283 PECAM1P16284 738 aaPredicted RBP9.15□□□□□ -0.94
CHD8-203ENST00000553283 HLA-DPA1P20036 260 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 MSH3P20585 1137 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 COMTP21964 271 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 LPOP22079 712 aaPredicted RBP9.15□□□□□ -0.94
CHD8-203ENST00000553283 CCL11P51671 97 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 PGDP52209 483 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 RPS18P62269 152 aaKnown RBP9.15□□□□□ -0.94
CHD8-203ENST00000553283 ADCY2Q08462 1091 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 MPP3Q13368 585 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 XRCC4Q13426 336 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 TRIM14Q14142 442 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 GPR19Q15760 415 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 TMTC4Q5T4D3 741 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 IZUMO3Q5VZ72 239 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 PAPD7Q5XG87 772 aaKnown RBP9.15□□□□□ -0.94
CHD8-203ENST00000553283 ARMC6Q6NXE6 501 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 SPOCD1Q6ZMY3 1216 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 OOSP2Q86WS3 158 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 TMEM126BQ8IUX1 230 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 ZNF567Q8N184 647 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 EFCAB3Q8N7B9 438 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 SLC38A9Q8NBW4 561 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 GALNT11Q8NCW6 608 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 IPMKQ8NFU5 416 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 OR2L2Q8NH16 312 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 P3H4Q92791 437 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 MR1Q95460 341 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 ZNF501Q96CX3 271 aaPredicted RBP9.15□□□□□ -0.94
CHD8-203ENST00000553283 LRFN5Q96NI6 719 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 ANP32EQ9BTT0 268 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 SLC25A23Q9BV35 468 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 WWP1Q9H0M0 922 aa9.15□□□□□ -0.94
CHD8-203ENST00000553283 ING2Q9H160 280 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms