RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 METRNLQ641Q3 311 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 NEPROQ6NW34 567 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 WASH2PQ6VEQ5 465 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 SLC9B2Q86UD5 537 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 CFAP206Q8IYR0 622 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 UNC5BQ8IZJ1 945 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 EBNA1BP2Q99848 306 aaKnown RBP13.84□□□□□ -0.19
PTCH1-226ENST00000553011 WDR83Q9BRX9 315 aaKnown RBP13.84□□□□□ -0.19
PTCH1-226ENST00000553011 WWP1Q9H0M0 922 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 LRRN3Q9H3W5 708 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 SARS2Q9NP81 518 aaKnown RBP13.84□□□□□ -0.19
PTCH1-226ENST00000553011 WASH6PQ9NQA3 447 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 GRHL1Q9NZI5 618 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 ATXN7L1Q9ULK2 861 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-226ENST00000553011 NEUROG3Q9Y4Z2 214 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 NTN3O00634 580 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 PRMT5O14744 637 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 ITGB6P18564 788 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 XRCC1P18887 633 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 PREPP48147 710 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 SLC7A5Q01650 507 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 TARDBPQ13148 414 aaKnown RBP eCLIP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 TUBB2AQ13885 445 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 SPIDRQ14159 915 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 CRYMQ14894 314 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 NR1D2Q14995 579 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 TRADDQ15628 312 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 LONRF1Q17RB8 773 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 AMZ1Q400G9 498 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 ZNF789Q5FWF6 425 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 MRNIPQ6NTE8 343 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 C8orf74Q6P047 294 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 NAPRTQ6XQN6 538 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 CCNI2Q6ZMN8 369 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 TRIM48Q8IWZ4 208 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 NOA1Q8NC60 698 aaKnown RBP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 BBOF1Q8ND07 529 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 GPR150Q8NGU9 434 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 LKAAEAR1Q8TD35 194 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 GFM1Q96RP9 751 aaKnown RBP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 LRRC1Q9BTT6 524 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 TUBB2BQ9BVA1 445 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 RAB17Q9H0T7 212 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 COG4Q9H9E3 785 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 VPS37BQ9H9H4 285 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 PLAC1Q9HBJ0 212 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 C20orf96Q9NUD7 363 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 WHRNQ9P202 907 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 ACSL5Q9ULC5 683 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 CLCA2Q9UQC9 943 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 CHMP2BQ9UQN3 213 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 UTP11Q9Y3A2 253 aaKnown RBP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 CFAP20Q9Y6A4 193 aaKnown RBP13.83□□□□□ -0.2
PTCH1-226ENST00000553011 FAM169AQ9Y6X4 670 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 ANKRD12Q6UB98 2062 aa13.83□□□□□ -0.2
PTCH1-226ENST00000553011 C17orf113A0A1B0GUU1 675 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 UBA6A0AVT1 1052 aaPredicted RBP13.82□□□□□ -0.2
PTCH1-226ENST00000553011 FAM221BA6H8Z2 402 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 KLHL33A6NCF5 533 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 IQCF5A8MTL0 148 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 QSOX1O00391 747 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 CSO75390 466 aaKnown RBP13.82□□□□□ -0.2
PTCH1-226ENST00000553011 NDUFS3O75489 264 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 VIPP01282 170 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 FTH1P02794 183 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 OR56A5P0C7T3 313 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 OGNP20774 298 aaKnown RBP13.82□□□□□ -0.2
PTCH1-226ENST00000553011 PDHA2P29803 388 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 HALP42357 657 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 GPR3P46089 330 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 EIF3BP55884 814 aaKnown RBP13.82□□□□□ -0.2
PTCH1-226ENST00000553011 PDIA2Q13087 525 aaKnown RBP13.82□□□□□ -0.2
PTCH1-226ENST00000553011 CALCOCO2Q13137 446 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 THOC5Q13769 683 aaKnown RBP13.82□□□□□ -0.2
PTCH1-226ENST00000553011 FASTKD3Q14CZ7 662 aaKnown RBP13.82□□□□□ -0.2
PTCH1-226ENST00000553011 BRD3Q15059 726 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 RPE65Q16518 533 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 TYSND1Q2T9J0 566 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 NKAIN2Q5VXU1 208 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 ZNF470Q6ECI4 717 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 DUS1LQ6P1R4 473 aaKnown RBP13.82□□□□□ -0.2
PTCH1-226ENST00000553011 RBM44Q6ZP01 1051 aaKnown RBP13.82□□□□□ -0.2
PTCH1-226ENST00000553011 CENPUQ71F23 418 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 SDCCAG8Q86SQ7 713 aaPredicted RBP13.82□□□□□ -0.2
PTCH1-226ENST00000553011 CILP2Q8IUL8 1156 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 ANKMY2Q8IV38 441 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 DENND6AQ8IWF6 608 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 KRT222Q8N1A0 295 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 MMGT1Q8N4V1 131 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 DCBLD1Q8N8Z6 715 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 MNS1Q8NEH6 495 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 ELMO1Q92556 727 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 LPGAT1Q92604 370 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 CXorf40BQ96DE9 158 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 CFAP36Q96G28 342 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 RMDN2Q96LZ7 410 aa13.82□□□□□ -0.2
PTCH1-226ENST00000553011 INSM2Q96T92 566 aaPredicted RBP13.82□□□□□ -0.2
PTCH1-226ENST00000553011 SLC38A3Q99624 504 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms