RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 BTN3A1O00481 513 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 CD3EAPO15446 510 aaKnown RBP12.2□□□□□ -0.46
HDAC7-230ENST00000552960 CYP4B1P13584 511 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 MTHFD2P13995 350 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 RAB15P59190 212 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 VBP1P61758 197 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 IL5RAQ01344 420 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 GRSF1Q12849 480 aaKnown RBP eCLIP12.2□□□□□ -0.46
HDAC7-230ENST00000552960 LCP2Q13094 533 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 ZNF846Q147U1 533 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 LAPTM4AQ15012 233 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 INAQ16352 499 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 BHLHA9Q7RTU4 235 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 GALNT5Q7Z7M9 940 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 DSG4Q86SJ6 1040 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 CADM3Q8N126 398 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 OR7A2PQ8NGA2 310 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 PNPT1Q8TCS8 783 aaKnown RBP12.2□□□□□ -0.46
HDAC7-230ENST00000552960 SMARCD1Q96GM5 515 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 ALPK1Q96QP1 1244 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 ZNF347Q96SE7 839 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 NDEL1Q9GZM8 345 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 NTN4Q9HB63 628 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 REV3LO60673 3130 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 AXIN1O15169 862 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 CPNE6O95741 557 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 HAPLN1P10915 354 aaPredicted RBP12.2□□□□□ -0.46
HDAC7-230ENST00000552960 IL12AP29459 219 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 SIRPB2Q5JXA9 342 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 C6orf141Q5SZD1 244 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 OVOS1Q6IE37 1185 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 ENPP6Q6UWR7 440 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 PRR23BQ6ZRT6 265 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 USP51Q70EK9 711 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 LRRC8DQ7L1W4 858 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 DEFB128Q7Z7B8 93 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 HTRA1Q92743 480 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 FAM32AQ9Y421 112 aaKnown RBP12.2□□□□□ -0.46
HDAC7-230ENST00000552960 NPEPPSL1A6NEC2 478 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 TRIM64A6NGJ6 449 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 H0Y858 1186 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 OR4F21O95013 312 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 ALPLP05186 524 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 UMPSP11172 480 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 ZNF37AP17032 561 aaPredicted RBP12.2□□□□□ -0.46
HDAC7-230ENST00000552960 NKX2-5P52952 324 aaPredicted RBP12.2□□□□□ -0.46
HDAC7-230ENST00000552960 TPTEP56180 551 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 KCNAB2Q13303 367 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 KANK2Q63ZY3 851 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 TIGD7Q6NT04 549 aaPredicted RBP12.2□□□□□ -0.46
HDAC7-230ENST00000552960 SLC24A5Q71RS6 500 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 TMEM199Q8N511 208 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 CNIH3Q8TBE1 160 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 FRS2Q8WU20 508 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 PSMG2Q969U7 264 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 TLR9Q9NR96 1032 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.2□□□□□ -0.46
HDAC7-230ENST00000552960 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.2□□□□□ -0.46
HDAC7-230ENST00000552960 INVSQ9Y283 1065 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 TMA7Q9Y2S6 64 aaKnown RBP12.2□□□□□ -0.46
HDAC7-230ENST00000552960 CCDC162PA2VCL2 907 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 E9PAM4 449 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 CACNG3O60359 315 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 MATN4O95460 622 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 HMBSP08397 361 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 PSMB9P28065 219 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 LHX1P48742 406 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 CD47Q08722 323 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 RCAN2Q14206 197 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 SEMA3AQ14563 771 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 SULT1C3Q6IMI6 304 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 SLC43A3Q8NBI5 491 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 OR10A6Q8NH74 314 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 PSMA8Q8TAA3 256 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 HMCESQ96FZ2 354 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 NODALQ96S42 347 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 LRRC3Q9BY71 257 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 YTHDF1Q9BYJ9 559 aaKnown RBP12.19□□□□□ -0.46
HDAC7-230ENST00000552960 SLC25A51Q9H1U9 297 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 GMIPQ9P107 970 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 MYLKQ15746 1914 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 CEP290O15078 2479 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 A6NL46 340 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 AQP9O43315 295 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 FTH1P02794 183 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 FGF4P08620 206 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 C7P10643 843 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 ODC1P11926 461 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 PIK3CGP48736 1102 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 PRKG2Q13237 762 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 SKIV2LQ15477 1246 aaKnown RBP12.19□□□□□ -0.46
HDAC7-230ENST00000552960 DDR2Q16832 855 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 CTU2Q2VPK5 515 aaKnown RBP12.19□□□□□ -0.46
HDAC7-230ENST00000552960 SLC39A12Q504Y0 691 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 TTC23Q5W5X9 447 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 MRNIPQ6NTE8 343 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 KDELC1Q6UW63 502 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 GLB1LQ6UWU2 654 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 SYVN1Q86TM6 617 aa12.19□□□□□ -0.46
HDAC7-230ENST00000552960 OR2T11Q8NH01 316 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms