RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 RBM44Q6ZP01 1051 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 FAM83HQ6ZRV2 1179 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 LRRC6Q86X45 466 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 TRIM48Q8IWZ4 208 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 RBM12BQ8IXT5 1001 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 PDIK1LQ8N165 341 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 CLDN19Q8N6F1 224 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 OTUD6BQ8N6M0 293 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 GPR150Q8NGU9 434 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 KIF18AQ8NI77 898 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 NAT14Q8WUY8 206 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 SH3KBP1Q96B97 665 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 LRRC39Q96DD0 335 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 GFM1Q96RP9 751 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 TRIM56Q9BRZ2 755 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 ERP44Q9BS26 406 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 CCM2Q9BSQ5 444 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 TRIM31Q9BZY9 425 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 RAB17Q9H0T7 212 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 UCK1Q9HA47 277 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 SCHIP1Q9P0W5 487 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 WHRNQ9P202 907 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 CPNE7Q9UBL6 633 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 ACSL5Q9ULC5 683 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 CLCA2Q9UQC9 943 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 MAP1BP46821 2468 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 ASPMQ8IZT6 3477 aa11.49□□□□□ -0.57
TRAFD1-209ENST00000552896 SNRNP200O75643 2136 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 A0A1W2PQM1 296 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 PRMT5O14744 637 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 LIN7AO14910 233 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 PFDN6O15212 129 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 PPM1DO15297 605 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 OR1I1O60431 355 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 MT-CO3P00414 261 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 POLBP06746 335 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 SLC35G4P0C7Q5 338 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 OR56A5P0C7T3 313 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 SPINK2P20155 84 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 RPS3P23396 243 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 PDX1P52945 283 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 EPHA4P54764 986 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 ARL4CP56559 192 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 CLDN6P56747 220 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 CCL7P80098 99 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 GPLD1P80108 840 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 DHX9Q08211 1270 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 CALCOCO2Q13137 446 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 RPA4Q13156 261 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 CBLBQ13191 982 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 CRYMQ14894 314 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 LONRF1Q17RB8 773 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 BBS9Q3SYG4 887 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 MSS51Q4VC12 460 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 DUPD1Q68J44 220 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 ZNF470Q6ECI4 717 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 C8orf74Q6P047 294 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 CCNI2Q6ZMN8 369 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 CILP2Q8IUL8 1156 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 LMNTD2Q8IXW0 634 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 MNS1Q8NEH6 495 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 GRAMD1AQ96CP6 724 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 CXorf40BQ96DE9 158 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 FCRL3Q96P31 734 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 TCF12Q99081 682 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 FAM167BQ9BTA0 163 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 TSSK1BQ9BXA7 367 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 LRRN3Q9H3W5 708 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 EPB41L1Q9H4G0 881 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 SYNDIG1Q9H7V2 258 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 COG4Q9H9E3 785 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 GNPTGQ9UJJ9 305 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 VPS9D1Q9Y2B5 631 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 WDR37Q9Y2I8 494 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 UTP11Q9Y3A2 253 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 PRSS21Q9Y6M0 314 aa11.48□□□□□ -0.57
TRAFD1-209ENST00000552896 IGHV1OR21-1A0A087WYE8 117 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 FAM149AA5PLN7 773 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 OR52A4PA6NMU1 304 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 E7ESA3 106 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 DUX1O43812 170 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 CSO75390 466 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 NDUFS3O75489 264 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 BANF1O75531 89 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 MTHFD1P11586 935 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 JUPP14923 745 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 ADARP55265 1226 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 CLCA4Q14CN2 919 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 MAP9Q49MG5 647 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 SYTL3Q4VX76 610 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 SPANXN3Q5MJ09 141 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 NEPROQ6NW34 567 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 SDCCAG8Q86SQ7 713 aaPredicted RBP11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 Q8N9G6 341 aaPredicted RBP11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 CALML6Q8TD86 181 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 LPGAT1Q92604 370 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 GATA6Q92908 595 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 RMDN2Q96LZ7 410 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms