RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 MSRB2Q9Y3D2 182 aa17.14■□□□□ 0.33
CDK4-207ENST00000550419 ASXL3Q9C0F0 2248 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 PRMT5O14744 637 aaPredicted RBP17.13■□□□□ 0.33
CDK4-207ENST00000550419 OR1I1O60431 355 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 RPS3P23396 243 aaKnown RBP eCLIP17.13■□□□□ 0.335e-9■■■■□ 20.7
CDK4-207ENST00000550419 RPL10P27635 214 aaKnown RBP17.13■□□□□ 0.33
CDK4-207ENST00000550419 PLOD1Q02809 727 aaPredicted RBP17.13■□□□□ 0.33
CDK4-207ENST00000550419 CRYMQ14894 314 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 LONRF1Q17RB8 773 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 SPANXN3Q5MJ09 141 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 C8orf74Q6P047 294 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 CCNI2Q6ZMN8 369 aaPredicted RBP17.13■□□□□ 0.33
CDK4-207ENST00000550419 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDK4-207ENST00000550419 CALML6Q8TD86 181 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 SEC14L1Q92503 715 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 TRIM56Q9BRZ2 755 aaKnown RBP17.13■□□□□ 0.33
CDK4-207ENST00000550419 CARD6Q9BX69 1037 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 TSSK1BQ9BXA7 367 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 PHACTR1Q9C0D0 580 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 P2RY12Q9H244 342 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 POT1Q9NUX5 634 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 GRHL1Q9NZI5 618 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 SCHIP1Q9P0W5 487 aaPredicted RBP17.13■□□□□ 0.33
CDK4-207ENST00000550419 ZNF624Q9P2J8 865 aaPredicted RBP17.13■□□□□ 0.33
CDK4-207ENST00000550419 CLCA2Q9UQC9 943 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 TEX264Q9Y6I9 313 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 PRSS21Q9Y6M0 314 aa17.13■□□□□ 0.33
CDK4-207ENST00000550419 CEP295Q9C0D2 2601 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 CTAGE15A4D2H0 777 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 LIN7AO14910 233 aaPredicted RBP17.12■□□□□ 0.33
CDK4-207ENST00000550419 NDUFS3O75489 264 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 TOP3BO95985 862 aaKnown RBP17.12■□□□□ 0.33
CDK4-207ENST00000550419 MT-CO3P00414 261 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 CTAGE8P0CG41 777 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 JUPP14923 745 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 SLC19A1P41440 591 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 EPHA4P54764 986 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 GPLD1P80108 840 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 MRPS25P82663 173 aaKnown RBP17.12■□□□□ 0.33
CDK4-207ENST00000550419 FRG1Q14331 258 aaKnown RBP17.12■□□□□ 0.33
CDK4-207ENST00000550419 BBS9Q3SYG4 887 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 RBM44Q6ZP01 1051 aaKnown RBP17.12■□□□□ 0.33
CDK4-207ENST00000550419 CTAGE6Q86UF2 777 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 CILP2Q8IUL8 1156 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 CTAGE4Q8IX94 777 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 CFAP206Q8IYR0 622 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 NAT14Q8WUY8 206 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 ZFPM2Q8WW38 1151 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 DEPDC7Q96QD5 511 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 DPH5Q9H2P9 285 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 LRRN3Q9H3W5 708 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 EPB41L1Q9H4G0 881 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 COG4Q9H9E3 785 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 INTS10Q9NVR2 710 aaKnown RBP17.12■□□□□ 0.33
CDK4-207ENST00000550419 KLK13Q9UKR3 277 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 WDR37Q9Y2I8 494 aa17.12■□□□□ 0.33
CDK4-207ENST00000550419 TRBV23OR9-2A0A075B6M9 112 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 A0A1W2PQM1 296 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 LILRA5A6NI73 299 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 EIF3HO15372 352 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDK4-207ENST00000550419 B4GAT1O43505 415 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 VIPP01282 170 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 RPLP0P05388 317 aaKnown RBP17.11■□□□□ 0.33
CDK4-207ENST00000550419 SLC35G4P0C7Q5 338 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 PBLDP30039 288 aaPredicted RBP17.11■□□□□ 0.33
CDK4-207ENST00000550419 ELK3P41970 407 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 CD151P48509 253 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 CCL7P80098 99 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 THOC5Q13769 683 aaKnown RBP17.11■□□□□ 0.33
CDK4-207ENST00000550419 SPIDRQ14159 915 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 CLCA4Q14CN2 919 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 SEPT7Q16181 437 aaKnown RBP17.11■□□□□ 0.33
CDK4-207ENST00000550419 RPE65Q16518 533 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 GLE1Q53GS7 698 aaKnown RBP17.11■□□□□ 0.33
CDK4-207ENST00000550419 CAPRIN2Q6IMN6 1127 aaKnown RBP17.11■□□□□ 0.33
CDK4-207ENST00000550419 ZNF449Q6P9G9 518 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 LDB1Q86U70 411 aaPredicted RBP17.11■□□□□ 0.33
CDK4-207ENST00000550419 IGDCC3Q8IVU1 814 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 CEP112Q8N8E3 955 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 GABPB2Q8TAK5 448 aaPredicted RBP17.11■□□□□ 0.33
CDK4-207ENST00000550419 LPGAT1Q92604 370 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 ART4Q93070 314 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 GFM1Q96RP9 751 aaKnown RBP17.11■□□□□ 0.33
CDK4-207ENST00000550419 DPYSL5Q9BPU6 564 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 FAM167BQ9BTA0 163 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 LRRC1Q9BTT6 524 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 OR52A5Q9H2C5 316 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 SLC40A1Q9NP59 571 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 C20orf96Q9NUD7 363 aaPredicted RBP17.11■□□□□ 0.33
CDK4-207ENST00000550419 ZC3H7BQ9UGR2 993 aaKnown RBP17.11■□□□□ 0.33
CDK4-207ENST00000550419 GNPTGQ9UJJ9 305 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 PCDHB1Q9Y5F3 818 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 PTPRBP23467 1997 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 RP1P56715 2156 aa17.11■□□□□ 0.33
CDK4-207ENST00000550419 IGHV1OR21-1A0A087WYE8 117 aa17.1■□□□□ 0.33
CDK4-207ENST00000550419 D6RAR5 112 aa17.1■□□□□ 0.33
CDK4-207ENST00000550419 GOLGA8KD6RF30 607 aa17.1■□□□□ 0.33
CDK4-207ENST00000550419 H3BMM5 538 aa17.1■□□□□ 0.33
CDK4-207ENST00000550419 GOLGA8TH3BQL2 631 aa17.1■□□□□ 0.33
CDK4-207ENST00000550419 CPNE6O95741 557 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms