RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 BAG1Q99933 345 aaPredicted RBP10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 ULBP3Q9BZM4 244 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 SLC25A18Q9H1K4 315 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 SIDT1Q9NXL6 827 aaKnown RBP10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 SEMA5BQ9P283 1151 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 TRIM10Q9UDY6 481 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 KCND3Q9UK17 655 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 WDR37Q9Y2I8 494 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 PCDHB3Q9Y5E6 796 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 HEBP2Q9Y5Z4 205 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 ARL5AQ9Y689 179 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 GOLGA6L3A6NEY3 463 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 OR2AG2A6NM03 316 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 AGAP14A8MT82 685 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 F5H423 210 aaPredicted RBP10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 SLC28A2O43868 658 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 GSTM1P09488 218 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 FAM87AP0C7U9 286 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 ITGB6P18564 788 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 NELFEP18615 380 aaKnown RBP10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 WT1P19544 449 aaPredicted RBP10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 ITGALP20701 1170 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 PSMB4P28070 264 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 ARL4DP49703 201 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 SEPHS1P49903 392 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 CTSCP53634 463 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 GFERP55789 205 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 CYP4F2P78329 520 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 GSTM4Q03013 218 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 PLCL1Q15111 1095 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 P3H1Q32P28 736 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 FNBP1LQ5T0N5 605 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 ARMC6Q6NXE6 501 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 IRGCQ6NXR0 463 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 ATG14Q6ZNE5 492 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 ARHGEF18Q6ZSZ5 1173 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 SNX20Q7Z614 316 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 PPP1R3BQ86XI6 285 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 RASGRP3Q8IV61 690 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 LRRC57Q8N9N7 239 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 OR8K5Q8NH50 307 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 SEC14L1Q92503 715 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 OR6C1Q96RD1 312 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 COPS8Q99627 209 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 TBL1YQ9BQ87 522 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 VPS37BQ9H9H4 285 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 APMAPQ9HDC9 416 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 IMPACTQ9P2X3 320 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 CRLS1Q9UJA2 301 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 RARRES3Q9UL19 164 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 PADI1Q9ULC6 663 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 TFR2Q9UP52 801 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 DUSP10Q9Y6W6 482 aa10.65□□□□□ -0.7
VTI1BP3-201ENST00000550220 PIEZO2Q9H5I5 2752 aa10.65□□□□□ -0.71
VTI1BP3-201ENST00000550220 LOC101059948A0A1B0GTJ6 334 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 UBA6A0AVT1 1052 aaPredicted RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 RCCD1A6NED2 376 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 MATN2O00339 956 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 GAPDHSO14556 408 aaPredicted RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 MAP3K7O43318 606 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 BUD23O43709 281 aaKnown RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 SLC35G4P0C7Q5 338 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 MTHFD1P11586 935 aaKnown RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 ATP1B2P14415 290 aaPredicted RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 TCN2P20062 427 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 STIP1P31948 543 aaKnown RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 STAT5AP42229 794 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 LEPRP48357 1165 aaKnown RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 HSD11B2P80365 405 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 KCNC4Q03721 635 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 LAMB3Q13751 1172 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 SEPT6Q14141 434 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 NFE2L1Q14494 772 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 KRT33BQ14525 404 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 GSE1Q14687 1217 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 DNTTIP2Q5QJE6 756 aaKnown RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 TMTC4Q5T4D3 741 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 FAM92BQ6ZTR7 304 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 TIPARPQ7Z3E1 657 aaKnown RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 LINC00523Q86TU6 105 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 OOSP2Q86WS3 158 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 KLHDC8BQ8IXV7 354 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 SIDT2Q8NBJ9 832 aaKnown RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 CCDC110Q8TBZ0 833 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 APOBEC4Q8WW27 367 aaKnown RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 RSC1A1Q92681 617 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 ALG3Q92685 438 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 STAMBPL1Q96FJ0 436 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 SLC41A2Q96JW4 573 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 ALS2CR12Q96Q35 445 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 FRMD8P1Q9BZ68 369 aaPredicted RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 LACRTQ9GZZ8 138 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 LRRC40Q9H9A6 602 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 IMP3Q9NV31 184 aaKnown RBP10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 HRASLS2Q9NWW9 162 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 KCTD3Q9Y597 815 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 RPS6KL1Q9Y6S9 549 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 SCN8AQ9UQD0 1980 aa10.64□□□□□ -0.71
VTI1BP3-201ENST00000550220 CFAP46Q8IYW2 2715 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 GRID2IPA4D2P6 1211 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms