RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 BEND7Q8N7W2 519 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-218ENST00000548945 GPR150Q8NGU9 434 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 VAT1Q99536 393 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 MAP3K3Q99759 626 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 TUBB2BQ9BVA1 445 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 ZNHIT6Q9NWK9 470 aaKnown RBP12.57□□□□□ -0.4
PTCH1-218ENST00000548945 UBP1Q9NZI7 540 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 PCDHGA9Q9Y5G4 932 aaKnown RBP12.57□□□□□ -0.4
PTCH1-218ENST00000548945 CRYBG3Q68DQ2 2970 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 GLYATL1P3A0A0U1RQE8 302 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 OR5K3A6NET4 321 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 CPNE3O75131 537 aaKnown RBP12.56□□□□□ -0.4
PTCH1-218ENST00000548945 ZBTB11O95625 1053 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-218ENST00000548945 EBLN1P0CF75 366 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 PYGMP11217 842 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 MTHFD1P11586 935 aaKnown RBP12.56□□□□□ -0.4
PTCH1-218ENST00000548945 CDKN2BP42772 138 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 ARL4DP49703 201 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 CTSCP53634 463 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 MLLT10P55197 1068 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 DYNLT1P63172 113 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 LAMB3Q13751 1172 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 NFE2L1Q14494 772 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 PLCL1Q15111 1095 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 SLC1A5Q15758 541 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 CHRNA6Q15825 494 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 PPP2R5EQ16537 467 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 LONRF2Q1L5Z9 754 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 DNTTIP2Q5QJE6 756 aaKnown RBP12.56□□□□□ -0.4
PTCH1-218ENST00000548945 FAM182AQ5T1J6 154 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 GPRC6AQ5T6X5 926 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 TMEM220Q6QAJ8 160 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 MFSD7Q6UXD7 560 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 FAM151BQ6UXP7 276 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 ZNF517Q6ZMY9 492 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-218ENST00000548945 FAM83HQ6ZRV2 1179 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-218ENST00000548945 GLT6D1Q7Z4J2 308 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 OOSP2Q86WS3 158 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 GALNT11Q8NCW6 608 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-218ENST00000548945 MRGPRX2Q96LB1 330 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 LRFN5Q96NI6 719 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 FCRL5Q96RD9 977 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 RBSNQ9H1K0 784 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 GRPEL1Q9HAV7 217 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 MLXIPLQ9NP71 852 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 LATS2Q9NRM7 1088 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 ACSL5Q9ULC5 683 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 INTUQ9ULD6 942 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 PKP3Q9Y446 797 aa12.56□□□□□ -0.4
PTCH1-218ENST00000548945 UBA6A0AVT1 1052 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-218ENST00000548945 MGAT4DA6NG13 374 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 GAPDHSO14556 408 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-218ENST00000548945 UGT1A9O60656 530 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 UGT1A6P19224 532 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 NFKB1P19838 968 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 LPOP22079 712 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-218ENST00000548945 UGT1A1P22309 533 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 UGT1A4P22310 534 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 PGDP52209 483 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 GSDMDP57764 484 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 MPP3Q13368 585 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 XRCC4Q13426 336 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 KCNAB1Q14722 419 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 TMTC4Q5T4D3 741 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 IZUMO3Q5VZ72 239 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 PAPD7Q5XG87 772 aaKnown RBP12.55□□□□□ -0.4
PTCH1-218ENST00000548945 B4GALNT4Q76KP1 1039 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 BLOC1S5Q8TDH9 187 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 RNF31Q96EP0 1072 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 OXNAD1Q96HP4 312 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-218ENST00000548945 CCDC42Q96M95 316 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 KIR3DX1Q9H7L2 352 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 UGT1A7Q9HAW7 530 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 UGT1A10Q9HAW8 530 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 UGT1A8Q9HAW9 530 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 KCND1Q9NSA2 647 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 HRASLS2Q9NWW9 162 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 KLHL8Q9P2G9 620 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-218ENST00000548945 PSMD13Q9UNM6 376 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 FARSAQ9Y285 508 aaKnown RBP12.55□□□□□ -0.4
PTCH1-218ENST00000548945 BTRCQ9Y297 605 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 PCDHGB7Q9Y5F8 929 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 CELSR2Q9HCU4 2923 aa12.55□□□□□ -0.4
PTCH1-218ENST00000548945 ANKRD12Q6UB98 2062 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 OR2AG2A6NM03 316 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 HACD1B0YJ81 288 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 MATN2O00339 956 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 PSTPIP1O43586 416 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 CST8O60676 142 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 VPS4BO75351 444 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 SCRG1O75711 98 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 DNAJB5O75953 348 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 PDGFAP04085 211 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 MSL3P1P0C860 447 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 MSH3P20585 1137 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 NDUFS1P28331 727 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 CHRNA4P43681 627 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 NOMO1Q15155 1222 aa12.54□□□□□ -0.4
PTCH1-218ENST00000548945 TFDP3Q5H9I0 405 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms