RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 PBLDP30039 288 aaPredicted RBP16.09■□□□□ 0.17
SSH1-208ENST00000548522 HALP42357 657 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 ARCN1P48444 511 aaKnown RBP16.09■□□□□ 0.17
SSH1-208ENST00000548522 DYNLT1P63172 113 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 ZBED6P86452 979 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 GTF2H3Q13889 308 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 CHRNA6Q15825 494 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 DNTTIP2Q5QJE6 756 aaKnown RBP16.09■□□□□ 0.17
SSH1-208ENST00000548522 FAM151BQ6UXP7 276 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 SYVN1Q86TM6 617 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 BEND7Q8N7W2 519 aaPredicted RBP16.09■□□□□ 0.17
SSH1-208ENST00000548522 ING2Q9H160 280 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 UGT1A7Q9HAW7 530 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 UGT1A10Q9HAW8 530 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 UGT1A8Q9HAW9 530 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 GLOD4Q9HC38 313 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 MLXIPLQ9NP71 852 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 IMP3Q9NV31 184 aaKnown RBP16.09■□□□□ 0.17
SSH1-208ENST00000548522 MAP4K5Q9Y4K4 846 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 SHANK1Q9Y566 2161 aa16.09■□□□□ 0.17
SSH1-208ENST00000548522 DOPEY1Q5JWR5 2465 aa16.08■□□□□ 0.17
SSH1-208ENST00000548522 OR5K3A6NET4 321 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 TLCD2A6NGC4 264 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 OR2AG2A6NM03 316 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 APOL1O14791 398 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 CPNE3O75131 537 aaKnown RBP16.08■□□□□ 0.16
SSH1-208ENST00000548522 SCRG1O75711 98 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 CD68P34810 354 aaPredicted RBP16.08■□□□□ 0.16
SSH1-208ENST00000548522 DMPKQ09013 629 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 MRPL49Q13405 166 aaKnown RBP16.08■□□□□ 0.16
SSH1-208ENST00000548522 MESDQ14696 234 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 AMZ2Q86W34 360 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 Q8NA96 180 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 SPDYE1Q8NFV5 336 aaPredicted RBP16.08■□□□□ 0.16
SSH1-208ENST00000548522 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.08■□□□□ 0.16
SSH1-208ENST00000548522 SSC4DQ8WTU2 575 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 THAP4Q8WY91 577 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 MR1Q95460 341 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 IQCDQ96DY2 449 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 GPR87Q9BY21 358 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 CHST8Q9H2A9 424 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 ACSS2Q9NR19 701 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 UVRAGQ9P2Y5 699 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 FAM8A1Q9UBU6 413 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 CAPN11Q9UMQ6 739 aa16.08■□□□□ 0.16
SSH1-208ENST00000548522 PCDHGA9Q9Y5G4 932 aaKnown RBP16.08■□□□□ 0.16
SSH1-208ENST00000548522 GAPDHSO14556 408 aaPredicted RBP16.07■□□□□ 0.16
SSH1-208ENST00000548522 MTHFD1P11586 935 aaKnown RBP16.07■□□□□ 0.16
SSH1-208ENST00000548522 PTPN3P26045 913 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 ARL4DP49703 201 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 RPS15P62841 145 aaKnown RBP16.07■□□□□ 0.16
SSH1-208ENST00000548522 TUBB4BP68371 445 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 ACY1Q03154 408 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 ABRQ12979 859 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 TUBB2AQ13885 445 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 PTPRCAPQ14761 206 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 PDK1Q15118 436 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 SLC14A2Q15849 920 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 GPRC6AQ5T6X5 926 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 PAPD7Q5XG87 772 aaKnown RBP16.07■□□□□ 0.16
SSH1-208ENST00000548522 KDELC1Q6UW63 502 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 ZNF517Q6ZMY9 492 aaPredicted RBP16.07■□□□□ 0.16
SSH1-208ENST00000548522 DET1Q7L5Y6 550 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 TMEM126BQ8IUX1 230 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 D2HGDHQ8N465 521 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 SLC25A41Q8N5S1 370 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 ADAMTS17Q8TE56 1095 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 CTNNBL1Q8WYA6 563 aaPredicted RBP16.07■□□□□ 0.16
SSH1-208ENST00000548522 ZNF501Q96CX3 271 aaPredicted RBP16.07■□□□□ 0.16
SSH1-208ENST00000548522 FCRL4Q96PJ5 515 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 TUBB2BQ9BVA1 445 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 TLR10Q9BXR5 811 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 MFRPQ9BY79 579 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 HRASLS2Q9NWW9 162 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 SAE1Q9UBE0 346 aaPredicted RBP16.07■□□□□ 0.16
SSH1-208ENST00000548522 FARSAQ9Y285 508 aaKnown RBP16.07■□□□□ 0.16
SSH1-208ENST00000548522 PCSK5Q92824 1860 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 CELSR2Q9HCU4 2923 aa16.07■□□□□ 0.16
SSH1-208ENST00000548522 CRYBG3Q68DQ2 2970 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 A0A0A6YYK5 440 aaPredicted RBP16.06■□□□□ 0.16
SSH1-208ENST00000548522 UBA6A0AVT1 1052 aaPredicted RBP16.06■□□□□ 0.16
SSH1-208ENST00000548522 TCP11X1B4DZS4 312 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 PPP1R12AO14974 1030 aaPredicted RBP16.06■□□□□ 0.16
SSH1-208ENST00000548522 LCA5LO95447 670 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 KRT1P04264 644 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 H2AFZP0C0S5 128 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 HMGCLP35914 325 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 SPAM1P38567 509 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 KPNA2P52292 529 aaKnown RBP16.06■□□□□ 0.16
SSH1-208ENST00000548522 WNT3AP56704 352 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 HSD11B2P80365 405 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 LLGL1Q15334 1064 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 INPP5JQ15735 1006 aaPredicted RBP16.06■□□□□ 0.16
SSH1-208ENST00000548522 SIRPB2Q5JXA9 342 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 FNBP1LQ5T0N5 605 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 CYB5D1Q6P9G0 228 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 TMEM220Q6QAJ8 160 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 H2AFVQ71UI9 128 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 ENDOVQ8N8Q3 282 aaKnown RBP16.06■□□□□ 0.16
SSH1-208ENST00000548522 DDHD1Q8NEL9 900 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms