RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 IL11RAQ14626 422 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 ATP1A1-AS1Q5TC04 95 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 ITPRIPL1Q6GPH6 555 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 IRGCQ6NXR0 463 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 DARS2Q6PI48 645 aaKnown RBP13.06□□□□□ -0.32
CPSF6-204ENST00000547486 CDKL3Q8IVW4 592 aaPredicted RBP13.06□□□□□ -0.32
CPSF6-204ENST00000547486 LILRA3Q8N6C8 439 aaPredicted RBP13.06□□□□□ -0.32
CPSF6-204ENST00000547486 GALNT6Q8NCL4 622 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
CPSF6-204ENST00000547486 OR13C4Q8NGS5 318 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 KIAA1143Q96AT1 154 aaPredicted RBP13.06□□□□□ -0.32
CPSF6-204ENST00000547486 ZDHHC12Q96GR4 267 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 MRFAP1L1Q96HT8 127 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 TRIM4Q9C037 500 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 WWP1Q9H0M0 922 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 SLC25A18Q9H1K4 315 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 TRIT1Q9H3H1 467 aaKnown RBP13.06□□□□□ -0.32
CPSF6-204ENST00000547486 FAM96AQ9H5X1 160 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 ASB8Q9H765 288 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 LUC7LQ9NQ29 371 aaKnown RBP13.06□□□□□ -0.32
CPSF6-204ENST00000547486 SEMA5BQ9P283 1151 aa13.06□□□□□ -0.32
CPSF6-204ENST00000547486 AAR2Q9Y312 384 aaKnown RBP13.06□□□□□ -0.32
CPSF6-204ENST00000547486 MRPS18BQ9Y676 258 aaKnown RBP13.06□□□□□ -0.32
CPSF6-204ENST00000547486 A0A0U1RQJ8 604 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 CCDC66A2RUB6 948 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 MGAT4DA6NG13 374 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 C2orf81A6NN90 581 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 AGAP14A8MT82 685 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 CCL22O00626 93 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 TERTO14746 1132 aaKnown RBP13.05□□□□□ -0.32
CPSF6-204ENST00000547486 SPAG6O75602 509 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 TIAF1O95411 115 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 MTHFD1P11586 935 aaKnown RBP13.05□□□□□ -0.32
CPSF6-204ENST00000547486 FGF5P12034 268 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 FOLR1P15328 257 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 NELFEP18615 380 aaKnown RBP13.05□□□□□ -0.32
CPSF6-204ENST00000547486 AKT1P31749 480 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 CCR10P46092 362 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 TMPRSS15P98073 1019 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 KCNAB2Q13303 367 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 MAP7Q14244 749 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 KCNAB1Q14722 419 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 LONRF2Q1L5Z9 754 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 DUS1LQ6P1R4 473 aaKnown RBP13.05□□□□□ -0.32
CPSF6-204ENST00000547486 C6orf15Q6UXA7 325 aaPredicted RBP13.05□□□□□ -0.32
CPSF6-204ENST00000547486 CERS6Q6ZMG9 384 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 ESX1Q8N693 406 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 OR2L2Q8NH16 312 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 SLC41A2Q96JW4 573 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 SPATA13Q96N96 652 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 IMP3Q9NV31 184 aaKnown RBP13.05□□□□□ -0.32
CPSF6-204ENST00000547486 HEMK1Q9Y5R4 338 aaPredicted RBP13.05□□□□□ -0.32
CPSF6-204ENST00000547486 RPS6KL1Q9Y6S9 549 aa13.05□□□□□ -0.32
CPSF6-204ENST00000547486 LDB2O43679 373 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 KIAA0754O94854 1291 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 TJP3O95049 919 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 WISP1O95388 367 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 POLBP06746 335 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 DLSTP36957 453 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 CDKN1CP49918 316 aaPredicted RBP13.04□□□□□ -0.32
CPSF6-204ENST00000547486 ZNF140P52738 457 aaPredicted RBP13.04□□□□□ -0.32
CPSF6-204ENST00000547486 KCNC4Q03721 635 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 CDC20Q12834 499 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 PRPSAP1Q14558 356 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 DEFB109BQ30KR1 87 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 BCL7AQ4VC05 210 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 C16orf46Q6P387 395 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 GAS2L3Q86XJ1 694 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 PTRH1Q86Y79 214 aaKnown RBP13.04□□□□□ -0.32
CPSF6-204ENST00000547486 RASGRP3Q8IV61 690 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 KLHDC8BQ8IXV7 354 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 CFAP206Q8IYR0 622 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 STARD8Q92502 1023 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 ZNF514Q96K75 400 aaPredicted RBP13.04□□□□□ -0.32
CPSF6-204ENST00000547486 CALR3Q96L12 384 aaKnown RBP13.04□□□□□ -0.32
CPSF6-204ENST00000547486 CATSPER2Q96P56 530 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 MAP3K3Q99759 626 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 TBL1YQ9BQ87 522 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 EFHD1Q9BUP0 239 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 ADNPQ9H2P0 1102 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 AKIRIN1Q9H9L7 192 aaPredicted RBP13.04□□□□□ -0.32
CPSF6-204ENST00000547486 ARNT2Q9HBZ2 717 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 FAM8A1Q9UBU6 413 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 CROTQ9UKG9 612 aa13.04□□□□□ -0.32
CPSF6-204ENST00000547486 PACSIN2Q9UNF0 486 aaPredicted RBP13.04□□□□□ -0.32
CPSF6-204ENST00000547486 GOLGA6L3A6NEY3 463 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 METTL18O95568 372 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 CRTAMO95727 393 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 FURINP09958 794 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 PRSS56P0CW18 603 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 TPH1P17752 444 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 TCN2P20062 427 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 VAV2P52735 878 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
CPSF6-204ENST00000547486 KCTD11Q693B1 232 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 CAPRIN2Q6IMN6 1127 aaKnown RBP13.03□□□□□ -0.32
CPSF6-204ENST00000547486 PWWP2BQ6NUJ5 590 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 ATG14Q6ZNE5 492 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 PPP1R3BQ86XI6 285 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 TMEM139Q8IV31 216 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms