RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 SMAD1Q15797 465 aaKnown RBP16.49■□□□□ 0.23
CCDC38-203ENST00000546803 ZNF470Q6ECI4 717 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 TMPRSS12Q86WS5 348 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 CACTIN-AS1Q8N1I8 211 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 GALNT15Q8N3T1 639 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 FAM167BQ9BTA0 163 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 CARD6Q9BX69 1037 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 FAM129AQ9BZQ8 928 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 COG4Q9H9E3 785 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 CPNE7Q9UBL6 633 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 GNPTGQ9UJJ9 305 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 CHMP2BQ9UQN3 213 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 PCDHB1Q9Y5F3 818 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 ZNF106Q9H2Y7 1883 aaKnown RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 PCNX2A6NKB5 2137 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 H3BMM5 538 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 LIN7AO14910 233 aaPredicted RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 PPM1DO15297 605 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 BRAFP15056 766 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 UBE2IP63279 158 aaKnown RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 INSM1Q01101 510 aaPredicted RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 GUCY2DQ02846 1103 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 FOXC1Q12948 553 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 SEPT7Q16181 437 aaKnown RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 ZNF658BQ4V348 819 aaPredicted RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 HP1BP3Q5SSJ5 553 aaPredicted RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 STEAP4Q687X5 459 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 PTRHD1Q6GMV3 140 aaKnown RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 UNC5AQ6ZN44 842 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 KCNMB4Q86W47 210 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 RBM12BQ8IXT5 1001 aaKnown RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 CHCHD4Q8N4Q1 142 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 FBXO25Q8TCJ0 367 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 LPGAT1Q92604 370 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 CFAP36Q96G28 342 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 PANX3Q96QZ0 392 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 P2RY12Q9H244 342 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 L2HGDHQ9H9P8 463 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 FAM114A2Q9NRY5 505 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 POT1Q9NUX5 634 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 IL1RAPL1Q9NZN1 696 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 SCHIP1Q9P0W5 487 aaPredicted RBP16.48■□□□□ 0.23
CCDC38-203ENST00000546803 WDR37Q9Y2I8 494 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 LAMA1P25391 3075 aa16.48■□□□□ 0.23
CCDC38-203ENST00000546803 UBA6A0AVT1 1052 aaPredicted RBP16.47■□□□□ 0.23
CCDC38-203ENST00000546803 ESPNB1AK53 854 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 BHMG1C9JSJ3 638 aaPredicted RBP16.47■□□□□ 0.23
CCDC38-203ENST00000546803 TCEA3O75764 348 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 S1PR4O95977 384 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 VIPP01282 170 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 ESR1P03372 595 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 SLC35G4P0C7Q5 338 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 SLC19A1P41440 591 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 FOXK2Q01167 660 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 CLCA4Q14CN2 919 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 TRADDQ15628 312 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 CLPPQ16740 277 aaPredicted RBP16.47■□□□□ 0.23
CCDC38-203ENST00000546803 HSP90AA5PQ58FG0 334 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 DNTTIP2Q5QJE6 756 aaKnown RBP16.47■□□□□ 0.23
CCDC38-203ENST00000546803 ZDHHC24Q6UX98 284 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 TMPRSS7Q7RTY8 843 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 SPRED1Q7Z699 444 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 ANKMY2Q8IV38 441 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 TRIM48Q8IWZ4 208 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 ZBED8Q8IZ13 594 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 FBXO36Q8NEA4 188 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 PYROXD1Q8WU10 500 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 ELMO1Q92556 727 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 CXorf40BQ96DE9 158 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 CERS2Q96G23 380 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 SLC38A3Q99624 504 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 WDR83Q9BRX9 315 aaKnown RBP16.47■□□□□ 0.23
CCDC38-203ENST00000546803 LRRN3Q9H3W5 708 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 UCK1Q9HA47 277 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 EPB41L5Q9HCM4 733 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 ZNF624Q9P2J8 865 aaPredicted RBP16.47■□□□□ 0.23
CCDC38-203ENST00000546803 FAM8A1Q9UBU6 413 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 RABGEF1Q9UJ41 708 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 FBXO5Q9UKT4 447 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 WASF3Q9UPY6 502 aa16.47■□□□□ 0.23
CCDC38-203ENST00000546803 ARID1BQ8NFD5 2236 aaPredicted RBP16.46■□□□□ 0.23
CCDC38-203ENST00000546803 WDR87Q6ZQQ6 2873 aa16.46■□□□□ 0.23
CCDC38-203ENST00000546803 MED19A0JLT2 244 aaPredicted RBP16.46■□□□□ 0.23
CCDC38-203ENST00000546803 NTN3O00634 580 aaPredicted RBP16.46■□□□□ 0.23
CCDC38-203ENST00000546803 KPNA5O15131 536 aa16.46■□□□□ 0.23
CCDC38-203ENST00000546803 HYAL3O43820 417 aaPredicted RBP16.46■□□□□ 0.23
CCDC38-203ENST00000546803 CD151P48509 253 aa16.46■□□□□ 0.23
CCDC38-203ENST00000546803 EIF3BP55884 814 aaKnown RBP16.46■□□□□ 0.23
CCDC38-203ENST00000546803 CCL7P80098 99 aa16.46■□□□□ 0.23
CCDC38-203ENST00000546803 SHC2P98077 582 aa16.46■□□□□ 0.23
CCDC38-203ENST00000546803 CTBP1Q13363 440 aa16.46■□□□□ 0.23
CCDC38-203ENST00000546803 RPE65Q16518 533 aa16.46■□□□□ 0.23
CCDC38-203ENST00000546803 HES3Q5TGS1 186 aa16.46■□□□□ 0.23
CCDC38-203ENST00000546803 CDCP2Q5VXM1 449 aa16.46■□□□□ 0.23
CCDC38-203ENST00000546803 CAPRIN2Q6IMN6 1127 aaKnown RBP16.46■□□□□ 0.23
CCDC38-203ENST00000546803 XKR5Q6UX68 686 aa16.46■□□□□ 0.23
CCDC38-203ENST00000546803 KIAA0408Q6ZU52 694 aa16.46■□□□□ 0.23
CCDC38-203ENST00000546803 DENND6AQ8IWF6 608 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms