RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 NAP1L1P55209 391 aaKnown RBP14□□□□□ -0.17
TROAP-203ENST00000546735 TMPRSS15P98073 1019 aa14□□□□□ -0.17
TROAP-203ENST00000546735 MAP7Q14244 749 aa14□□□□□ -0.17
TROAP-203ENST00000546735 SPARCL1Q14515 664 aa14□□□□□ -0.17
TROAP-203ENST00000546735 KCNAB1Q14722 419 aa14□□□□□ -0.17
TROAP-203ENST00000546735 PLCL1Q15111 1095 aa14□□□□□ -0.17
TROAP-203ENST00000546735 COLEC12Q5KU26 742 aa14□□□□□ -0.17
TROAP-203ENST00000546735 ANKRD20A2Q5SQ80 823 aa14□□□□□ -0.17
TROAP-203ENST00000546735 ANKRD20A1Q5TYW2 823 aa14□□□□□ -0.17
TROAP-203ENST00000546735 ANKRD20A3Q5VUR7 823 aa14□□□□□ -0.17
TROAP-203ENST00000546735 ITPRIPL1Q6GPH6 555 aa14□□□□□ -0.17
TROAP-203ENST00000546735 RANBP10Q6VN20 620 aa14□□□□□ -0.17
TROAP-203ENST00000546735 LILRA3Q8N6C8 439 aaPredicted RBP14□□□□□ -0.17
TROAP-203ENST00000546735 SPDYE1Q8NFV5 336 aaPredicted RBP14□□□□□ -0.17
TROAP-203ENST00000546735 OR13C4Q8NGS5 318 aa14□□□□□ -0.17
TROAP-203ENST00000546735 CCDC110Q8TBZ0 833 aa14□□□□□ -0.17
TROAP-203ENST00000546735 STAMBPL1Q96FJ0 436 aa14□□□□□ -0.17
TROAP-203ENST00000546735 MAP3K3Q99759 626 aa14□□□□□ -0.17
TROAP-203ENST00000546735 OSBPL8Q9BZF1 889 aa14□□□□□ -0.17
TROAP-203ENST00000546735 RAB33BQ9H082 229 aa14□□□□□ -0.17
TROAP-203ENST00000546735 FAM96AQ9H5X1 160 aa14□□□□□ -0.17
TROAP-203ENST00000546735 EPHA6Q9UF33 1036 aa14□□□□□ -0.17
TROAP-203ENST00000546735 PCDHA3Q9Y5H8 950 aa14□□□□□ -0.17
TROAP-203ENST00000546735 DNMT3AQ9Y6K1 912 aaPredicted RBP14□□□□□ -0.17
TROAP-203ENST00000546735 CCL22O00626 93 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 KCNN4O15554 427 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 PJA2O43164 708 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 KATNA1O75449 491 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 ANXA9O76027 345 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 SRP72O76094 671 aaKnown RBP13.99□□□□□ -0.17
TROAP-203ENST00000546735 FURINP09958 794 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 RBP3P10745 1247 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 MTHFD1P11586 935 aaKnown RBP13.99□□□□□ -0.17
TROAP-203ENST00000546735 FOLR1P15328 257 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 NELFEP18615 380 aaKnown RBP13.99□□□□□ -0.17
TROAP-203ENST00000546735 CTNNA2P26232 953 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 EIF3EP60228 445 aaKnown RBP13.99□□□□□ -0.17
TROAP-203ENST00000546735 XIAPP98170 497 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 TLE1Q04724 770 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 IL11RAQ14626 422 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 TAF1AQ15573 450 aaPredicted RBP13.99□□□□□ -0.17
TROAP-203ENST00000546735 LONRF2Q1L5Z9 754 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 METRNLQ641Q3 311 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 DARS2Q6PI48 645 aaKnown RBP13.99□□□□□ -0.17
TROAP-203ENST00000546735 FBXO38Q6PIJ6 1188 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 PPP1R3BQ86XI6 285 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 CDKL3Q8IVW4 592 aaPredicted RBP13.99□□□□□ -0.17
TROAP-203ENST00000546735 C12orf66Q96MD2 445 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 SMOXQ9NWM0 555 aa13.99□□□□□ -0.17
TROAP-203ENST00000546735 REXO2Q9Y3B8 237 aaKnown RBP13.99□□□□□ -0.17
TROAP-203ENST00000546735 EPN1Q9Y6I3 576 aaPredicted RBP13.99□□□□□ -0.17
TROAP-203ENST00000546735 MGAT4DA6NG13 374 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 C2orf81A6NN90 581 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 SGTAO43765 313 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 POLBP06746 335 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 EBLN1P0CF75 366 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 ARCN1P48444 511 aaKnown RBP13.98□□□□□ -0.17
TROAP-203ENST00000546735 COPS2P61201 443 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 MC1RQ01726 317 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 MSLNQ13421 630 aaPredicted RBP13.98□□□□□ -0.17
TROAP-203ENST00000546735 TUBB3Q13509 450 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 ERV3-1Q14264 604 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 PRPSAP1Q14558 356 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 DNTTIP2Q5QJE6 756 aaKnown RBP13.98□□□□□ -0.17
TROAP-203ENST00000546735 PWWP2BQ6NUJ5 590 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 RAD9BQ6WBX8 426 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 TMEM135Q86UB9 458 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 SIDT2Q8NBJ9 832 aaKnown RBP13.98□□□□□ -0.17
TROAP-203ENST00000546735 ACRBPQ8NEB7 543 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 C9orf43Q8TAL5 461 aaPredicted RBP13.98□□□□□ -0.17
TROAP-203ENST00000546735 APOBEC4Q8WW27 367 aaKnown RBP13.98□□□□□ -0.17
TROAP-203ENST00000546735 UBXN4Q92575 508 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 ALG3Q92685 438 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 ABHD17AQ96GS6 310 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 SLC41A2Q96JW4 573 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 RUFY1Q96T51 708 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 LACRTQ9GZZ8 138 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 EPN3Q9H201 632 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 AKIRIN1Q9H9L7 192 aaPredicted RBP13.98□□□□□ -0.17
TROAP-203ENST00000546735 LUC7LQ9NQ29 371 aaKnown RBP13.98□□□□□ -0.17
TROAP-203ENST00000546735 HRASLS2Q9NWW9 162 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 SEMA5BQ9P283 1151 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 CRLS1Q9UJA2 301 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 TUBD1Q9UJT1 453 aa13.98□□□□□ -0.17
TROAP-203ENST00000546735 AAR2Q9Y312 384 aaKnown RBP13.98□□□□□ -0.17
TROAP-203ENST00000546735 OR5K3A6NET4 321 aa13.97□□□□□ -0.17
TROAP-203ENST00000546735 CYSRT1A8MQ03 144 aa13.97□□□□□ -0.17
TROAP-203ENST00000546735 DDX3YO15523 660 aaKnown RBP13.97□□□□□ -0.17
TROAP-203ENST00000546735 NTRK1P04629 796 aa13.97□□□□□ -0.17
TROAP-203ENST00000546735 PRSS56P0CW18 603 aa13.97□□□□□ -0.17
TROAP-203ENST00000546735 PYGMP11217 842 aa13.97□□□□□ -0.17
TROAP-203ENST00000546735 NR1D1P20393 614 aa13.97□□□□□ -0.17
TROAP-203ENST00000546735 ARL4DP49703 201 aa13.97□□□□□ -0.17
TROAP-203ENST00000546735 ZNF75DP51815 510 aa13.97□□□□□ -0.17
TROAP-203ENST00000546735 RWDD2BP57060 319 aa13.97□□□□□ -0.17
TROAP-203ENST00000546735 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.97□□□□□ -0.17
TROAP-203ENST00000546735 DENND5AQ6IQ26 1287 aa13.97□□□□□ -0.17
TROAP-203ENST00000546735 FAM199XQ6PEV8 388 aaPredicted RBP13.97□□□□□ -0.17
TROAP-203ENST00000546735 CFAP206Q8IYR0 622 aa13.97□□□□□ -0.17
TROAP-203ENST00000546735 OR2L2Q8NH16 312 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms