RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ERVK-6Q9BXR3 956 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 SEZ6LQ9BYH1 1024 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 MEAF6Q9HAF1 191 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 ENTPD7Q9NQZ7 604 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 AGPAT4Q9NRZ5 378 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 ERVK-18Q9QC07 812 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 BOLA1Q9Y3E2 137 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 HS3ST4Q9Y661 456 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 SEC22BO75396 215 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 CAPN15O75808 1086 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 CPSF4O95639 269 aaKnown RBP14.48□□□□□ -0.09
HOXC11-202ENST00000546378 FAM163BP0C2L3 166 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 POU1F1P28069 291 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 IL12AP29459 219 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 ARSFP54793 590 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 AQP6Q13520 282 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 IHHQ14623 411 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 OR2T11Q8NH01 316 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 ZNF296Q8WUU4 475 aaPredicted RBP14.48□□□□□ -0.09
HOXC11-202ENST00000546378 RNF167Q9H6Y7 350 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 CATSPERBQ9H7T0 1116 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 NSMCE4AQ9NXX6 385 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 CD300AQ9UGN4 299 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 PLXNA1Q9UIW2 1896 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 NCAM2O15394 837 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 MTSS1O43312 755 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 BCAS1O75363 584 aaPredicted RBP14.47□□□□□ -0.09
HOXC11-202ENST00000546378 PGLSO95336 258 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 PORP16435 677 aaPredicted RBP14.47□□□□□ -0.09
HOXC11-202ENST00000546378 GKP32189 559 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 RFC2P35250 354 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 OR1G1P47890 313 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 TRPC1P48995 793 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 CDC42EP1Q00587 391 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 ARHGEF7Q14155 803 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 ZNF549Q6P9A3 640 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 Q6ZNX1 250 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 ARHGAP12Q8IWW6 846 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 MCOLN3Q8TDD5 553 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 SMARCD1Q96GM5 515 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 BARD1Q99728 777 aaKnown RBP14.47□□□□□ -0.09
HOXC11-202ENST00000546378 RUBCNLQ9H714 662 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 VRTNQ9H8Y1 702 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 CATSPERZQ9NTU4 200 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 MTRRQ9UBK8 725 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 PKP3Q9Y446 797 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 SPEGQ15772 3267 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 CBFA2T3O75081 653 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 DEAF1O75398 565 aaPredicted RBP14.47□□□□□ -0.09
HOXC11-202ENST00000546378 SEC24AO95486 1093 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 CHRNA1P02708 482 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 HTR1BP28222 390 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 CCT8P50990 548 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 PFKPQ01813 784 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 SLC36A3Q495N2 470 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 FAM98BQ52LJ0 330 aaKnown RBP14.47□□□□□ -0.09
HOXC11-202ENST00000546378 OVOS1Q6IE37 1185 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 GLT6D1Q7Z4J2 308 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 SLC22A9Q8IVM8 553 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 FAM217AQ8IXS0 508 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 PLK2Q9NYY3 685 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 MATN3O15232 486 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 EPHA2P29317 976 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 HOXD12P35452 270 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 HPCAL1P37235 193 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 CCNYL2Q5T2Q4 361 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 METTL23Q86XA0 190 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 SLC44A2Q8IWA5 706 aaPredicted RBP14.47□□□□□ -0.09
HOXC11-202ENST00000546378 OR2T12Q8NG77 320 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 ADAM2Q99965 735 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 ALOXE3Q9BYJ1 711 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 FKBPLQ9UIM3 349 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 PADI3Q9ULW8 664 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 PDE10AQ9Y233 779 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 ORC6Q9Y5N6 252 aa14.47□□□□□ -0.09
HOXC11-202ENST00000546378 S1PR4O95977 384 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 COL6A1P12109 1028 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 TNFRSF1BP20333 461 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 MAGEA12P43365 314 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 CD47Q08722 323 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 ACAP2Q15057 778 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 RFTN2Q52LD8 501 aaPredicted RBP14.46□□□□□ -0.09
HOXC11-202ENST00000546378 CCDC92Q53HC0 331 aaPredicted RBP14.46□□□□□ -0.09
HOXC11-202ENST00000546378 MRNIPQ6NTE8 343 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 CROCCP3Q8IVE0 287 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 OR10T2Q8NGX3 314 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 HM13Q8TCT9 377 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 CALML6Q8TD86 181 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 UTP15Q8TED0 518 aaKnown RBP14.46□□□□□ -0.09
HOXC11-202ENST00000546378 RORBQ92753 470 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 EBPLQ9BY08 206 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 ZNF385DQ9H6B1 395 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 CARS2Q9HA77 564 aaKnown RBP14.46□□□□□ -0.09
HOXC11-202ENST00000546378 PCDHGA4Q9Y5G9 962 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 TRPV2Q9Y5S1 764 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 SQORQ9Y6N5 450 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 MYO9BQ13459 2157 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 MLYCDO95822 493 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 RPS3AP61247 264 aaKnown RBP14.46□□□□□ -0.09
HOXC11-202ENST00000546378 ADAM17P78536 824 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms