RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 UROSP10746 265 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 ATF6P18850 670 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 CAPGP40121 348 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 MTHFRP42898 656 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 FAM174BQ3ZCQ3 159 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 CYP20A1Q6UW02 462 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 GCNT7Q6ZNI0 430 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 FAM43BQ6ZT52 329 aaPredicted RBP14.83□□□□□ -0.03
USP28-214ENST00000545540 BEND5Q7L4P6 421 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 ITFG1Q8TB96 612 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 SEPT8Q92599 483 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 MYOCQ99972 504 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 SEZ6LQ9BYH1 1024 aa14.83□□□□□ -0.03
USP28-214ENST00000545540 LEF1Q9UJU2 399 aaPredicted RBP14.83□□□□□ -0.03
USP28-214ENST00000545540 DRGXA6NNA5 263 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 ANKRD66B4E2M5 251 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 H0Y858 1186 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 TOR1BO14657 336 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 DIRAS1O95057 198 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 RHOCP08134 193 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 CYBAP13498 195 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 ALDH4A1P30038 563 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 PIGAP37287 484 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 PRKG2Q13237 762 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 BFSP2Q13515 415 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 ZBED5Q49AG3 693 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 TMTC4Q5T4D3 741 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 GALNT5Q7Z7M9 940 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 CARNMT1Q8N4J0 409 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 TET1Q8NFU7 2136 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 OR56A4Q8NGH8 313 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 NCLNQ969V3 563 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 TADA1Q96BN2 335 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 RNF38Q9H0F5 515 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 KLQ9UEF7 1012 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 WARS2Q9UGM6 360 aaKnown RBP14.83□□□□□ -0.04
USP28-214ENST00000545540 PRSS21Q9Y6M0 314 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 GNGT2O14610 69 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 CKBP12277 381 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 CYP4B1P13584 511 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 LPOP22079 712 aaPredicted RBP14.83□□□□□ -0.04
USP28-214ENST00000545540 ATP4BP51164 291 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 NEK2P51955 445 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 ACVR1Q04771 509 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 BNIP2Q12982 314 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 PHKG1Q16816 387 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 SPESP1Q6UW49 350 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 FRS2Q8WU20 508 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 SKA2Q8WVK7 121 aaPredicted RBP14.83□□□□□ -0.04
USP28-214ENST00000545540 GPR63Q9BZJ6 419 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 PRDM8Q9NQV8 689 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 SEPT3Q9UH03 358 aa14.83□□□□□ -0.04
USP28-214ENST00000545540 C2orf78A6NCI8 922 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 MATN4O95460 622 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 PRKAR2AP13861 404 aaKnown RBP14.82□□□□□ -0.04
USP28-214ENST00000545540 TYSND1Q2T9J0 566 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 INTS11Q5TA45 600 aaKnown RBP14.82□□□□□ -0.04
USP28-214ENST00000545540 DLEU7Q6UYE1 221 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 GOLGA7Q7Z5G4 137 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 GIPC3Q8TF64 312 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 C8orf48Q96LL4 319 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 NLRC5Q86WI3 1866 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 GSTA4O15217 222 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 BMP10O95393 424 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 CORO1AP31146 461 aaKnown RBP14.82□□□□□ -0.04
USP28-214ENST00000545540 HTR7P34969 479 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 SUOXP51687 545 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 ERVK-8P63133 956 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 ADRM1Q16186 407 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 CPSF6Q16630 551 aaKnown RBP eCLIP14.82□□□□□ -0.04
USP28-214ENST00000545540 SPANXN4Q5MJ08 99 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 BORAQ6PGQ7 559 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 AFTPHQ6ULP2 937 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 PIWIL3Q7Z3Z3 882 aaKnown RBP14.82□□□□□ -0.04
USP28-214ENST00000545540 MFSD2AQ8NA29 543 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 HM13Q8TCT9 377 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 TIMMDC1Q9NPL8 285 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 RANBP2P49792 3224 aaKnown RBP14.82□□□□□ -0.04
USP28-214ENST00000545540 FAM155AB1AL88 458 aaPredicted RBP14.82□□□□□ -0.04
USP28-214ENST00000545540 OR7A17O14581 309 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 ACSL4O60488 711 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 ADAMTS4O75173 837 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 PENKP01210 267 aaPredicted RBP14.82□□□□□ -0.04
USP28-214ENST00000545540 HMOX2P30519 316 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 SLC26A3P40879 764 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 PTRHD1Q6GMV3 140 aaKnown RBP14.82□□□□□ -0.04
USP28-214ENST00000545540 SLC24A5Q71RS6 500 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 GPR150Q8NGU9 434 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.82□□□□□ -0.042e-7■■■■■ 62.8
USP28-214ENST00000545540 PYCR2Q96C36 320 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 DUS3LQ96G46 650 aaKnown RBP14.82□□□□□ -0.04
USP28-214ENST00000545540 PSKH2Q96QS6 385 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 TRIM54Q9BYV2 358 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 ELOVL2Q9NXB9 296 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 PADI4Q9UM07 663 aa14.82□□□□□ -0.04
USP28-214ENST00000545540 C1orf232A0A0U1RR37 186 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 SYCE1LA8MT33 242 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 NBNO60934 754 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 GSSP48637 474 aa14.81□□□□□ -0.04
USP28-214ENST00000545540 TANKQ92844 425 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms