RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 HRASLS2Q9NWW9 162 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 MAP10Q9P2G4 905 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 CD48P09326 243 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 CA5AP35218 305 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 PRKCIP41743 596 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 ARL4DP49703 201 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 KPNA2P52292 529 aaKnown RBP14.35□□□□□ -0.11
RTN3-214ENST00000545432 UBXN1Q04323 297 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 MMRN1Q13201 1228 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 SSPNQ14714 243 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 NCF4Q15080 339 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 CCDC122Q5T0U0 273 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 TMTC4Q5T4D3 741 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 ALS2CLQ60I27 953 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 METRNLQ641Q3 311 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 SPOCD1Q6ZMY3 1216 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.35□□□□□ -0.11
RTN3-214ENST00000545432 FAF2Q96CS3 445 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 TRIM11Q96F44 468 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 UNKQ9C0B0 810 aaKnown RBP14.35□□□□□ -0.11
RTN3-214ENST00000545432 AIPL1Q9NZN9 384 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 CROCCQ5TZA2 2017 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 PIKFYVEQ9Y2I7 2098 aa14.35□□□□□ -0.11
RTN3-214ENST00000545432 SETD2Q9BYW2 2564 aaPredicted RBP14.34□□□□□ -0.11
RTN3-214ENST00000545432 E2F3O00716 465 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 POP7O75817 140 aaKnown RBP14.34□□□□□ -0.11
RTN3-214ENST00000545432 IGHEP01854 428 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 MTHFD1P11586 935 aaKnown RBP14.34□□□□□ -0.11
RTN3-214ENST00000545432 CD86P42081 329 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 SLC10A2Q12908 348 aaPredicted RBP14.34□□□□□ -0.11
RTN3-214ENST00000545432 DPYSL3Q14195 570 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 ELOAQ14241 798 aaKnown RBP14.34□□□□□ -0.11
RTN3-214ENST00000545432 SLC14A2Q15849 920 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 ATP13A5Q4VNC0 1218 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 DCAF10Q5QP82 559 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 FAM83HQ6ZRV2 1179 aaPredicted RBP14.34□□□□□ -0.11
RTN3-214ENST00000545432 CUZD1Q86UP6 607 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 AMZ2Q86W34 360 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 RAB43Q86YS6 212 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 SYTL1Q8IYJ3 562 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 OR1L3Q8NH93 324 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 ZNF653Q96CK0 615 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 HDAC11Q96DB2 347 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 FER1L6-AS2Q96M78 137 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 AGAP3Q96P47 875 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 SRPK1Q96SB4 655 aaKnown RBP14.34□□□□□ -0.11
RTN3-214ENST00000545432 HAUS4Q9H6D7 363 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 C1GALT1Q9NS00 363 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 TRIM10Q9UDY6 481 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 SHOC2Q9UQ13 582 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 ZNF711Q9Y462 761 aa14.34□□□□□ -0.11
RTN3-214ENST00000545432 CNTRLQ7Z7A1 2325 aa14.33□□□□□ -0.11
RTN3-214ENST00000545432 AKAP9Q99996 3911 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 HIVEP1P15822 2718 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 CSMD2Q7Z408 3487 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 LRRTM2O43300 516 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 IPO13O94829 963 aaKnown RBP14.33□□□□□ -0.12
RTN3-214ENST00000545432 LCA5LO95447 670 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 ALPPP05187 535 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 STSP08842 583 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 HNRNPH3P31942 346 aaKnown RBP14.33□□□□□ -0.12
RTN3-214ENST00000545432 PER3P56645 1201 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 IFI35P80217 286 aaPredicted RBP14.33□□□□□ -0.12
RTN3-214ENST00000545432 CDK18Q07002 472 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 ADCY2Q08462 1091 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 GALNT3Q14435 633 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 LYPLAL1Q5VWZ2 237 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 IGFL2Q6UWQ7 119 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 MRGPREQ86SM8 312 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 OOSP2Q86WS3 158 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 MCEMP1Q8IX19 187 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 GALNT16Q8N428 558 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 IMP4Q96G21 291 aaKnown RBP14.33□□□□□ -0.12
RTN3-214ENST00000545432 PPM1MQ96MI6 270 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 INSM2Q96T92 566 aaPredicted RBP14.33□□□□□ -0.12
RTN3-214ENST00000545432 ZNF670Q9BS34 389 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 HSD3B7Q9H2F3 369 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 KIR3DX1Q9H7L2 352 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 ACTR5Q9H9F9 607 aaPredicted RBP14.33□□□□□ -0.12
RTN3-214ENST00000545432 AGPAT4Q9NRZ5 378 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 SLC24A2Q9UI40 661 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 POMT2Q9UKY4 750 aa14.33□□□□□ -0.12
RTN3-214ENST00000545432 MDC1Q14676 2089 aaKnown RBP14.32□□□□□ -0.12
RTN3-214ENST00000545432 H3BMH7 237 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 MX2P20592 715 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 HMGCLP35914 325 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 CTSCP53634 463 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 ZBTB17Q13105 803 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 RAPSNQ13702 412 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 E4F1Q66K89 784 aaPredicted RBP14.32□□□□□ -0.12
RTN3-214ENST00000545432 TRAPPC5Q8IUR0 188 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 ZADH2Q8N4Q0 377 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 PQLC3Q8N755 202 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 RASGEF1AQ8N9B8 481 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 TM9SF4Q92544 642 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 CLIP3Q96DZ5 547 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 PITPNM3Q9BZ71 974 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 ILKAPQ9H0C8 392 aaPredicted RBP14.32□□□□□ -0.12
RTN3-214ENST00000545432 ZBTB20Q9HC78 741 aaPredicted RBP14.32□□□□□ -0.12
RTN3-214ENST00000545432 IL26Q9NPH9 171 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms