RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 MARCH5Q9NX47 278 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 TNFRSF10DQ9UBN6 386 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 SLC9A2Q9UBY0 812 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 PCDHB4Q9Y5E5 795 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 ADAMTS20P59510 1910 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 CNOT1A5YKK6 2376 aaKnown RBP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 UNC79Q9P2D8 2635 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 A0A1W2PQ67 120 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 FAM159BA6NKW6 160 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 LINC01387J3KSC0 135 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 PLOD2O00469 737 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 DLGAP1O14490 977 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 GAS2O43903 313 aaKnown RBP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 MAN1A2O60476 641 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 PLIN3O60664 434 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 AVILO75366 819 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 TMEM63AO94886 807 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 PRB1P04280 392 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 KRT8P05787 483 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 TRAPPC2P0DI81 140 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 TRAPPC2BP0DI82 140 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 ETS1P14921 441 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 NCF2P19878 526 aaPredicted RBP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 MATN1P21941 496 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 RPL22P35268 128 aaKnown RBP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 ELK3P41970 407 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 CASP3P42574 277 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 CLK3P49761 638 aaKnown RBP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 PPP5CP53041 499 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 PRKAA2P54646 552 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 GABARAPL2P60520 117 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 IL2P60568 153 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 MAMLD1Q13495 774 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 GALNT3Q14435 633 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 KCNJ11Q14654 390 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 GRM3Q14832 879 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 PCBP2Q15366 365 aaKnown RBP eCLIP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 BBS9Q3SYG4 887 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 SPATS1Q496A3 300 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 ZC3H12BQ5HYM0 836 aaKnown RBP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 CEP78Q5JTW2 689 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 RBM48Q5RL73 367 aaKnown RBP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 BROXQ5VW32 411 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 ANKRD22Q5VYY1 191 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 RINT1Q6NUQ1 792 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 HACD2Q6Y1H2 254 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 C1orf186Q6ZWK4 172 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 CHSY3Q70JA7 882 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 PRSS48Q7RTY5 328 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 SPRED1Q7Z699 444 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 LINC00523Q86TU6 105 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 ADGRF2Q8IZF7 708 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 SLC38A6Q8IZM9 456 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 NDUFAF2Q8N183 169 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 SFRP1Q8N474 314 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 NIPA2Q8N8Q9 360 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 OSCP1Q8WVF1 389 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 CRYGNQ8WXF5 182 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 FKBP10Q96AY3 582 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 SLC45A3Q96JT2 553 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 CEP295NLQ96MC4 621 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 SLC29A1Q99808 456 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 MKRN2Q9H000 416 aaKnown RBP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 TRIT1Q9H3H1 467 aaKnown RBP4.56□□□□□ -1.68
CNGA1-209ENST00000544810 IFT22Q9H7X7 185 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 SYTL2Q9HCH5 934 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 NDFIP2Q9NV92 336 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 SMOXQ9NWM0 555 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 NUP50Q9UKX7 468 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 HIF3AQ9Y2N7 669 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 MAU2Q9Y6X3 613 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 DOCK5Q9H7D0 1870 aa4.56□□□□□ -1.68
CNGA1-209ENST00000544810 ARID2Q68CP9 1835 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 IGKV6D-21A0A0A0MT36 114 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 LOC100653049A0A140TA62 436 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 OR5K3A6NET4 321 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ZSCAN5BA6NJL1 495 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CYB561D2O14569 222 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 NRP1O14786 923 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 TRIM24O15164 1050 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 PHGDHO43175 533 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 DLX3O60479 287 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 BANF1O75531 89 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 TOM1L1O75674 476 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 RPP40O75818 363 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 KRT34O76011 436 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 DDHD2O94830 711 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 KCNH1O95259 989 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 HNRNPA1P09651 372 aaKnown RBP eCLIP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 FCGR1AP12314 374 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CDH1P12830 882 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 DARSP14868 501 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 MX2P20592 715 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 HOXC13P31276 330 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CAPGP40121 348 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 GRIA3P42263 894 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CDKN2BP42772 138 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 NSFP46459 744 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms