RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 GLRBP48167 497 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SNX16P57768 344 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ACTR1AP61163 376 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 HHEXQ03014 270 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 GNA12Q03113 381 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 CHAF1BQ13112 559 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 NME3Q13232 169 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SLC39A14Q15043 492 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 UGP2Q16851 508 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 PLEKHN1Q494U1 663 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-220ENST00000544550 EMC4Q5J8M3 183 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 LRRC73Q5JTD7 316 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ANKRD40Q6AI12 368 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 FCRL6Q6DN72 434 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 BRAT1Q6PJG6 821 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SLC30A9Q6PML9 568 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 TMEM270Q6UE05 265 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 IGFL3Q6UXB1 125 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 RPTNQ6XPR3 784 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ARHGAP36Q6ZRI8 547 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 LHFPL2Q6ZUX7 228 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 TFAP2DQ7Z6R9 452 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 TMEM110Q86TL2 294 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SLC9B2Q86UD5 537 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 FJX1Q86VR8 437 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 PPP1R3BQ86XI6 285 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 NRROSQ86YC3 692 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 DEFB106AQ8N104 65 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ZNF808Q8N4W9 903 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-220ENST00000544550 NETO2Q8NC67 525 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 OR7D4Q8NG98 312 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 OR6K2Q8NGY2 324 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SPATA3Q8NHX4 192 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 UHMK1Q8TAS1 419 aaKnown RBP4.04□□□□□ -1.76
SNHG1-220ENST00000544550 CT55Q8WUE5 264 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 CHTF18Q8WVB6 975 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 TFAP2BQ92481 460 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 NCSTNQ92542 709 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SEMA4DQ92854 862 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 RELTQ969Z4 430 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SLC2A13Q96QE2 648 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 OR6C1Q96RD1 312 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 TTC1Q99614 292 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 NUDT9Q9BW91 350 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ZYG11BQ9C0D3 744 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 TTYH3Q9C0H2 523 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 TKTL2Q9H0I9 626 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 WDCPQ9H6R7 721 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 IFT22Q9H7X7 185 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 PDE7BQ9NP56 450 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SARS2Q9NP81 518 aaKnown RBP4.04□□□□□ -1.76
SNHG1-220ENST00000544550 TNFRSF12AQ9NP84 129 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ARHGEF38Q9NXL2 777 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SIDT1Q9NXL6 827 aaKnown RBP4.04□□□□□ -1.76
SNHG1-220ENST00000544550 LNPEPQ9UIQ6 1025 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 GPR160Q9UJ42 338 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 STAP1Q9ULZ2 295 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SMC3Q9UQE7 1217 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ZKSCAN5Q9Y2L8 839 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 MFHAS1Q9Y4C4 1052 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 PCDHB4Q9Y5E5 795 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 FBN3Q75N90 2809 aa4.04□□□□□ -1.76
SNHG1-220ENST00000544550 ZNF106Q9H2Y7 1883 aaKnown RBP4.04□□□□□ -1.76
SNHG1-220ENST00000544550 SDK2Q58EX2 2172 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 MN1Q10571 1320 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 TSPAN11A1L157 253 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 E5RJQ4 531 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 ZNF185O15231 689 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 TEX33O43247 280 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 RECQL5O94762 991 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 MYL1P05976 194 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 IVLP07476 585 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 DBHP09172 617 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 EPB41P11171 864 aaKnown RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 ZNF28P17035 718 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 AK4P27144 223 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 MMP12P39900 470 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 ARL4AP40617 200 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 MAPKAPK2P49137 400 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 VAV2P52735 878 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 ART1P52961 327 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 ERVFRD-1P60508 538 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 RHOAP61586 193 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 PITX1P78337 314 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 CEBPZQ03701 1054 aaKnown RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 CETN1Q12798 172 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 STK4Q13043 487 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 CUL4BQ13620 913 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 CRB2Q5IJ48 1285 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 MIIPQ5JXC2 388 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 IZUMO3Q5VZ72 239 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 STEAP3Q658P3 488 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 KCTD16Q68DU8 428 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 BICRALQ6AI39 1079 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 PNCKQ6P2M8 343 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 CBLL1Q75N03 491 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 KCNMB4Q86W47 210 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms