RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 CNTN4Q8IWV2 1026 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 TSPYL1Q9H0U9 437 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 PRDM8Q9NQV8 689 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 FBXO5Q9UKT4 447 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 SPTBN4Q9H254 2564 aa16.8■□□□□ 0.28
RABGGTA-203ENST00000543002 UBA6A0AVT1 1052 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 OR5K4A6NMS3 321 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 GSTA2P09210 222 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 ACADVLP49748 655 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 SIM1P81133 766 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 ZNF789Q5FWF6 425 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 XKR5Q6UX68 686 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 CFAP206Q8IYR0 622 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 SFRP1Q8N474 314 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 C2CD4AQ8NCU7 369 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 OR6C4Q8NGE1 309 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 PATE1Q8WXA2 126 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 NAT6Q93015 286 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 C9orf72Q96LT7 481 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 BIRC8Q96P09 236 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 FMO2Q99518 471 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 PPANQ9NQ55 473 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 TOR4AQ9NXH8 423 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 MOCS1Q9NZB8 636 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 GNPTGQ9UJJ9 305 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 ACSL5Q9ULC5 683 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 CRYL1Q9Y2S2 319 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 PCDHB1Q9Y5F3 818 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 PIKFYVEQ9Y2I7 2098 aa16.79■□□□□ 0.28
RABGGTA-203ENST00000543002 KIR2DS5A0A0G2JLQ3 304 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 A0A0G2JNG1 304 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 PDZK1P1A8MUH7 402 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 KIR2DS3K7RE56 304 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 SLU7O95391 586 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 ESR1P03372 595 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 BRAFP15056 766 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 RPL10P27635 214 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 SSTR1P30872 391 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 EIF3BP55884 814 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 MAZP56270 477 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 TUBB4BP68371 445 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 MGAT5Q09328 741 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 ILKQ13418 452 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 KIR2DS5Q14953 304 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 TEDDM1Q5T9Z0 273 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 PTRHD1Q6GMV3 140 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 GUSBP11Q6P575 273 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 KIAA0408Q6ZU52 694 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 CYS1Q717R9 158 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 ARL14Q8N4G2 192 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 MAPK15Q8TD08 544 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 SLC37A2Q8TED4 501 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 TSSK1BQ9BXA7 367 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 COG4Q9H9E3 785 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 FBXO6Q9NRD1 293 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 SCHIP1Q9P0W5 487 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 FAM8A1Q9UBU6 413 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 PCDHGA1Q9Y5H4 931 aa16.78■□□□□ 0.28
RABGGTA-203ENST00000543002 TRBV23OR9-2A0A075B6M9 112 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 CPED1A4D0V7 1026 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 H3BMM5 538 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 LIN7AO14910 233 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 NUDT21O43809 227 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 FTH1P19P0C7X4 201 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 PKMP14618 531 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 GLB1P16278 677 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 FMO4P31512 558 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 LEPRP48357 1165 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 GPX6P59796 221 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 MPP1Q00013 466 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 RPA4Q13156 261 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 SEPT7Q16181 437 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 PPM1JQ5JR12 505 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 CTSL3PQ5NE16 218 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 ZNF449Q6P9G9 518 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 CAPN12Q6ZSI9 719 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 C3orf62Q6ZUJ4 267 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 EFL1Q7Z2Z2 1120 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 GALNT7Q86SF2 657 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 SLCO6A1Q86UG4 719 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 RELL1Q8IUW5 271 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 LILRA3Q8N6C8 439 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 IFI44Q8TCB0 444 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 LKAAEAR1Q8TD35 194 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 ELMO1Q92556 727 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 PANX3Q96QZ0 392 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 LRRC4CQ9HCJ2 640 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 NFU1Q9UMS0 254 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 APOBEC2Q9Y235 224 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 WDR37Q9Y2I8 494 aa16.77■□□□□ 0.28
RABGGTA-203ENST00000543002 IQCF5A8MTL0 148 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 RFPL3O75679 317 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 DKK1O94907 266 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 HAUS5O94927 633 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 TRIM16O95361 564 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 GP1BAP07359 652 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 F7P08709 466 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 ITGB6P18564 788 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 XRCC1P18887 633 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 KCNA4P22459 653 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms