RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.96□□□□□ -0.33
TNC-212ENST00000542877 TRMT10BQ6PF06 316 aaKnown RBP12.96□□□□□ -0.33
TNC-212ENST00000542877 SIX5Q8N196 739 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 FAM156AQ8NDB6 213 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 IPCEF1Q8WWN9 437 aaPredicted RBP12.96□□□□□ -0.33
TNC-212ENST00000542877 NSMCE3Q96MG7 304 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 C1orf109Q9NX04 203 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 DTLQ9NZJ0 730 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 SLC7A8Q9UHI5 535 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 EVLQ9UI08 416 aaPredicted RBP12.96□□□□□ -0.33
TNC-212ENST00000542877 FBXW11Q9UKB1 542 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 LDOC1O95751 146 aaPredicted RBP12.96□□□□□ -0.33
TNC-212ENST00000542877 ADH1CP00326 375 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 SAGP10523 405 aaPredicted RBP12.96□□□□□ -0.33
TNC-212ENST00000542877 LAMP2P13473 410 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 CA9Q16790 459 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 TMEM214Q6NUQ4 689 aaKnown RBP12.96□□□□□ -0.33
TNC-212ENST00000542877 TAC4Q86UU9 113 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 TMC8Q8IU68 726 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 NAT8LQ8N9F0 302 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 MINDY2Q8NBR6 621 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 OR52J3Q8NH60 311 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 SLC35B2Q8TB61 432 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 DPF3Q92784 378 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 PLK2Q9NYY3 685 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 TMEM63AO94886 807 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 MT-CYBP00156 380 aaPredicted RBP12.96□□□□□ -0.33
TNC-212ENST00000542877 CDH12P55289 794 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 AP1S1P61966 158 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 IFI44LQ53G44 452 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 DAW1Q8N136 415 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 PACRGLQ8N7B6 248 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 EBF4Q9BQW3 602 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 KCNN2Q9H2S1 579 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 IMP3Q9NV31 184 aaKnown RBP12.96□□□□□ -0.33
TNC-212ENST00000542877 C9JVG2 144 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 MAGEB3O15480 346 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 CHIT1Q13231 466 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 DPYSL2Q16555 572 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 KIAA1324Q6UXG2 1013 aaKnown RBP12.96□□□□□ -0.34
TNC-212ENST00000542877 PEX5LQ8IYB4 626 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 NTPCRQ9BSD7 190 aaKnown RBP12.96□□□□□ -0.34
TNC-212ENST00000542877 CFAP97Q9P2B7 532 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 GMEB1Q9Y692 573 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 TM4SF1P30408 202 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 RGS8P57771 180 aaPredicted RBP12.96□□□□□ -0.34
TNC-212ENST00000542877 DAOAP59103 153 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 CYP4F8P98187 520 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 MERTKQ12866 999 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 MYBPC3Q14896 1274 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 DPY19L1Q2PZI1 675 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 CXorf57Q6NSI4 855 aaKnown RBP12.96□□□□□ -0.34
TNC-212ENST00000542877 USP43Q70EL4 1123 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 JAZF1Q86VZ6 243 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 CRYBG2Q8N1P7 616 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 FIBCD1Q8N539 461 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 AZIN2Q96A70 460 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.34
TNC-212ENST00000542877 KLRG1Q96E93 195 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 SNX27Q96L92 541 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 ZNF347Q96SE7 839 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 FEM1AQ9BSK4 669 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 YTHDF1Q9BYJ9 559 aaKnown RBP12.96□□□□□ -0.34
TNC-212ENST00000542877 ATG10Q9H0Y0 220 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 TFB2MQ9H5Q4 396 aaKnown RBP12.96□□□□□ -0.34
TNC-212ENST00000542877 RRAGCQ9HB90 399 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 CALML5Q9NZT1 146 aa12.96□□□□□ -0.34
TNC-212ENST00000542877 EIF2B4Q9UI10 523 aaKnown RBP12.96□□□□□ -0.34
TNC-212ENST00000542877 A0A1B0GVM2 712 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 TCAF2A6NFQ2 919 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 RIIAD1A6NNX1 92 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 IFNA6P05013 189 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 UGT2B4P06133 528 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 NR4A1P22736 598 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 PPP2R2BQ00005 443 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 DCBLD1Q8N8Z6 715 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 PIGXQ8TBF5 258 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 ASB9Q96DX5 294 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 HMCESQ96FZ2 354 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 RNF208Q9H0X6 261 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 NMUR1Q9HB89 426 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 C8GP07360 202 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 ALDH4A1P30038 563 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 GPD2P43304 727 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 EEFSECP57772 596 aaKnown RBP12.95□□□□□ -0.34
TNC-212ENST00000542877 RPS14P62263 151 aaKnown RBP12.95□□□□□ -0.34
TNC-212ENST00000542877 E2F2Q14209 437 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 CRY2Q49AN0 593 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 SLC9B1Q4ZJI4 515 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 TREML2Q5T2D2 321 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 FRMD7Q6ZUT3 714 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 OR10H5Q8NGA6 315 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 CITED4Q96RK1 184 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 LRRC3Q9BY71 257 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 IL1RAPQ9NPH3 570 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 EQTNQ9NQ60 294 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 PHPT1Q9NRX4 125 aaPredicted RBP12.95□□□□□ -0.34
TNC-212ENST00000542877 OXSMQ9NWU1 459 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 TAS2R7Q9NYW3 318 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 MTRRQ9UBK8 725 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms