RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 ZC3HC1Q86WB0 502 aaKnown RBP16.82■□□□□ 0.28
LIG1-204ENST00000542460 KIAA2013Q8IYS2 634 aa16.82■□□□□ 0.28
LIG1-204ENST00000542460 HM13Q8TCT9 377 aa16.82■□□□□ 0.28
LIG1-204ENST00000542460 MCMBPQ9BTE3 642 aa16.82■□□□□ 0.28
LIG1-204ENST00000542460 AARSD1Q9BTE6 412 aaKnown RBP16.82■□□□□ 0.28
LIG1-204ENST00000542460 RHOJQ9H4E5 214 aa16.82■□□□□ 0.28
LIG1-204ENST00000542460 GULP1Q9UBP9 304 aa16.82■□□□□ 0.28
LIG1-204ENST00000542460 DCHS1Q96JQ0 3298 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 PRR19A6NJB7 356 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 E5RI56 91 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 TPP1O14773 563 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 KPNA5O15131 536 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 SPRP35270 261 aaPredicted RBP16.81■□□□□ 0.28
LIG1-204ENST00000542460 HSD17B3P37058 310 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 ABCG1P45844 678 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 ZNF658BQ4V348 819 aaPredicted RBP16.81■□□□□ 0.28
LIG1-204ENST00000542460 METRNLQ641Q3 311 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 DBX2Q6ZNG2 339 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 CFAP206Q8IYR0 622 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 KRT222Q8N1A0 295 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 FAM46DQ8NEK8 389 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 ELMO1Q92556 727 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 KCNJ9Q92806 393 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 RBBP8Q99708 897 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 CCDC77Q9BR77 488 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 OSGEPL1Q9H4B0 414 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 LATS2Q9NRM7 1088 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 SPATS2LQ9NUQ6 558 aaKnown RBP16.81■□□□□ 0.28
LIG1-204ENST00000542460 NLGN3Q9NZ94 848 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 TAAR2Q9P1P5 351 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 SPTBN4Q9H254 2564 aa16.81■□□□□ 0.28
LIG1-204ENST00000542460 EXOC1LA0A1B0GW35 172 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 CCDC151A5D8V7 595 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 C4orf47A7E2U8 309 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 LIN7AO14910 233 aaPredicted RBP16.8■□□□□ 0.28
LIG1-204ENST00000542460 GDF9O60383 454 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 NIPSNAP2O75323 286 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 ALPPL2P10696 532 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 ITGB6P18564 788 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 CCR7P32248 378 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 PLOD1Q02809 727 aaPredicted RBP16.8■□□□□ 0.28
LIG1-204ENST00000542460 NFE2L1Q14494 772 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 UAP1Q16222 522 aaPredicted RBP16.8■□□□□ 0.28
LIG1-204ENST00000542460 DEFB133Q30KQ1 61 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 MREGQ8N565 214 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 GPATCH11Q8N954 259 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 LKAAEAR1Q8TD35 194 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 ASZ1Q8WWH4 475 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 MRRFQ96E11 262 aaKnown RBP16.8■□□□□ 0.28
LIG1-204ENST00000542460 ATXN7L3BQ96GX2 97 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 VPS39Q96JC1 886 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 NDNQ99608 321 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 DUSP23Q9BVJ7 150 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 DPEP2Q9H4A9 486 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 FAM8A1Q9UBU6 413 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 ACSL5Q9ULC5 683 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 IKBKGQ9Y6K9 419 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 LRP4O75096 1905 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 RALGAPA1Q6GYQ0 2036 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 FFAR2O15552 330 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 VPS26AO75436 327 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 FAM155BO75949 473 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 APOA4P06727 396 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 GIMD1P0DJR0 217 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 CD9P21926 228 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 AOAHP28039 575 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 SKIV2L2P42285 1042 aaKnown RBP16.8■□□□□ 0.28
LIG1-204ENST00000542460 MSH2P43246 934 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 RPA4Q13156 261 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 BOP1Q14137 746 aaKnown RBP16.8■□□□□ 0.28
LIG1-204ENST00000542460 INAVAQ3KP66 663 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 UAP1L1Q3KQV9 507 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 RBM20Q5T481 1227 aaKnown RBP16.8■□□□□ 0.28
LIG1-204ENST00000542460 STPG1Q5TH74 334 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 HECTD2Q5U5R9 776 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 FAM45BPQ6NSW5 357 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 WASH2PQ6VEQ5 465 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 FAM83HQ6ZRV2 1179 aaPredicted RBP16.8■□□□□ 0.28
LIG1-204ENST00000542460 OTOAQ7RTW8 1153 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 FAM45AQ8TCE6 357 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 SLC44A1Q8WWI5 657 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 PAFAH2Q99487 392 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 COG4Q9H9E3 785 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 SARS2Q9NP81 518 aaKnown RBP16.8■□□□□ 0.28
LIG1-204ENST00000542460 WASH6PQ9NQA3 447 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 TAS2R13Q9NYV9 303 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 TBC1D29Q9UFV1 150 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 FETUBQ9UGM5 382 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 PCOLCE2Q9UKZ9 415 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 MED16Q9Y2X0 877 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 VWA7Q9Y334 891 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 ADAMTS9Q9P2N4 1935 aa16.8■□□□□ 0.28
LIG1-204ENST00000542460 DNAH14Q0VDD8 3507 aa16.79■□□□□ 0.28
LIG1-204ENST00000542460 TMEM131Q92545 1883 aa16.79■□□□□ 0.28
LIG1-204ENST00000542460 FAM95CA0A1B0GW59 222 aa16.79■□□□□ 0.28
LIG1-204ENST00000542460 SLC5A10A0PJK1 596 aa16.79■□□□□ 0.28
LIG1-204ENST00000542460 POC1B-GALNT4F8VUJ3 575 aa16.79■□□□□ 0.28
LIG1-204ENST00000542460 FLRT2O43155 660 aa16.79■□□□□ 0.28
LIG1-204ENST00000542460 SNX2O60749 519 aa16.79■□□□□ 0.28
LIG1-204ENST00000542460 INHBAP08476 426 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms