RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 TBC1D3BA6NDS4 549 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 IFNA8P32881 189 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 STC1P52823 247 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 RHDQ02161 417 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 SERINC3Q13530 473 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 DEFB115Q30KQ5 88 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 UAP1L1Q3KQV9 507 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 SERINC5Q86VE9 423 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 MAF1Q9H063 256 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 RAB23Q9ULC3 237 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 MAST2Q6P0Q8 1798 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 SHANK3Q9BYB0 1731 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 ANKDD1BA6NHY2 528 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 SERPINI2O75830 405 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 BCAS2O75934 225 aaPredicted RBP15.89■□□□□ 0.13
VARS2-212ENST00000542001 H6PDO95479 791 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 FADS2O95864 444 aaKnown RBP15.89■□□□□ 0.13
VARS2-212ENST00000542001 SLC7A1P30825 629 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 PRKCQQ04759 706 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 PABPC1LQ4VXU2 614 aaKnown RBP15.89■□□□□ 0.13
VARS2-212ENST00000542001 TTC23Q5W5X9 447 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 CYP20A1Q6UW02 462 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 RANBP10Q6VN20 620 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 CHSY3Q70JA7 882 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 ZBTB2Q8N680 514 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 PTERQ96BW5 349 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 IMP4Q96G21 291 aaKnown RBP15.89■□□□□ 0.13
VARS2-212ENST00000542001 CTPS2Q9NRF8 586 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 ABCB10Q9NRK6 738 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 GJD2Q9UKL4 321 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 RECQL5O94762 991 aaPredicted RBP15.88■□□□□ 0.13
VARS2-212ENST00000542001 SERPINB1P30740 379 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 PSMD7P51665 324 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 FNDC3BQ53EP0 1204 aaKnown RBP15.88■□□□□ 0.13
VARS2-212ENST00000542001 SPANXN4Q5MJ08 99 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 TXNDC11Q6PKC3 985 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 SMURF2Q9HAU4 748 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 DMTF1Q9Y222 760 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 SPO11Q9Y5K1 396 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 TRBV23OR9-2A0A075B6M9 112 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 J3QRK9 145 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 GABRDO14764 452 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 ADGRF1Q5T601 910 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 BROXQ5VW32 411 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 ANKRD26P1Q6NSI1 321 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 KCTD8Q6ZWB6 473 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 OR8H2Q8N162 312 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 ZNF513Q8N8E2 541 aaPredicted RBP15.88■□□□□ 0.13
VARS2-212ENST00000542001 FBXL8Q96CD0 374 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 PLEKHA8Q96JA3 519 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 KLHL32Q96NJ5 620 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 ASAH2Q9NR71 780 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 C3orf18Q9UK00 162 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 ELOVL7A1L3X0 281 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 C2orf78A6NCI8 922 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 PRKD3O94806 890 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 STATHP02808 62 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 OPN1SWP03999 348 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 STK19P49842 368 aaPredicted RBP15.88■□□□□ 0.13
VARS2-212ENST00000542001 XIAPP98170 497 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 NR1D2Q14995 579 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 ARHGAP12Q8IWW6 846 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 KLHDC9Q8NEP7 349 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 MYLIPQ8WY64 445 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 FUBP3Q96I24 572 aaKnown RBP eCLIP15.88■□□□□ 0.13
VARS2-212ENST00000542001 C3orf30Q96M34 536 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 SLC29A1Q99808 456 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 TPK1Q9H3S4 243 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 EPB41L1Q9H4G0 881 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 SCML2Q9UQR0 700 aa15.88■□□□□ 0.13
VARS2-212ENST00000542001 LOC730098B7Z3J9 87 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 APOA1P02647 267 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 IL7RP16871 459 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 CSTF3Q12996 717 aaKnown RBP15.87■□□□□ 0.13
VARS2-212ENST00000542001 TP53BP2Q13625 1128 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 ACBD5Q5T8D3 534 aaPredicted RBP15.87■□□□□ 0.13
VARS2-212ENST00000542001 ISCA2Q86U28 154 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 OR7A2PQ8NGA2 310 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 IL12RB2Q99665 862 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 USE1Q9NZ43 259 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 TMCC3Q9ULS5 477 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 TRAV19A0A0A6YYK7 116 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 MBLAC1A4D2B0 266 aaPredicted RBP15.87■□□□□ 0.13
VARS2-212ENST00000542001 ERAL1O75616 437 aaKnown RBP15.87■□□□□ 0.13
VARS2-212ENST00000542001 FESP07332 822 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 ALOX12P18054 663 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 MAPKAPK2P49137 400 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 HTR6P50406 440 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 MERTKQ12866 999 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 BNIP3Q12983 259 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 TGFBIQ15582 683 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 PATL1Q86TB9 770 aaKnown RBP15.87■□□□□ 0.13
VARS2-212ENST00000542001 TSPAN18Q96SJ8 248 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 ZIC5Q96T25 663 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 RNF11Q9Y3C5 154 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 CA12O43570 354 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 THRBP10828 461 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 KIR3DL1P43629 444 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 FAM189BP81408 668 aa15.87■□□□□ 0.13
VARS2-212ENST00000542001 CACNG1Q06432 222 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms