RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 RPS15P62841 145 aaKnown RBP7.13□□□□□ -1.27
YBX3-209ENST00000540747 TMEM115Q12893 351 aaPredicted RBP7.13□□□□□ -1.27
YBX3-209ENST00000540747 ABRQ12979 859 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 PDK2Q15119 407 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 GPR19Q15760 415 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 STX1AQ16623 288 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 FIGNQ5HY92 759 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 CCDC122Q5T0U0 273 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 PRAMEF17Q5VTA0 474 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 FAM69BQ5VUD6 431 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 C1QL3Q5VWW1 255 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 ZNF385CQ66K41 422 aaPredicted RBP7.13□□□□□ -1.27
YBX3-209ENST00000540747 DSELQ8IZU8 1212 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 TTC30BQ8N4P2 665 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 ZBTB2Q8N680 514 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 ENDOVQ8N8Q3 282 aaKnown RBP7.13□□□□□ -1.27
YBX3-209ENST00000540747 RASGEF1AQ8N9B8 481 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 DDHD1Q8NEL9 900 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 INPP5DQ92835 1189 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 SNRNP40Q96DI7 357 aaKnown RBP7.13□□□□□ -1.27
YBX3-209ENST00000540747 PPM1MQ96MI6 270 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 OLFM3Q96PB7 478 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 RANBP9Q96S59 729 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 NLNQ9BYT8 704 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 SLC29A3Q9BZD2 475 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 SLC25A51Q9H1U9 297 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 IL26Q9NPH9 171 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 ACSS2Q9NR19 701 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 KCND1Q9NSA2 647 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 HAUS2Q9NVX0 235 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 LUZP4Q9P127 313 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 TCFL5Q9UL49 500 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 ZFHX3Q15911 3703 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 FER1L5A0AVI2 2057 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 CNTRLQ7Z7A1 2325 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 A0A1B0GTH6 734 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 C3orf70A6NLC5 250 aaPredicted RBP7.12□□□□□ -1.27
YBX3-209ENST00000540747 H3BMH7 237 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 MEN1O00255 615 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 GPR39O43194 453 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 KRT86O43790 486 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 TMEM63AO94886 807 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 PROSCO94903 275 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 ZBTB11O95625 1053 aaPredicted RBP7.12□□□□□ -1.27
YBX3-209ENST00000540747 NDST3O95803 873 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 MTHFD1P11586 935 aaKnown RBP7.12□□□□□ -1.27
YBX3-209ENST00000540747 POU3F2P20265 443 aaPredicted RBP7.12□□□□□ -1.27
YBX3-209ENST00000540747 TNFRSF8P28908 595 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 HMGCLP35914 325 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 KPNA2P52292 529 aaKnown RBP7.12□□□□□ -1.27
YBX3-209ENST00000540747 VAV2P52735 878 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 TERF1P54274 439 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 GSDMDP57764 484 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 CDK18Q07002 472 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 NR6A1Q15406 480 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 PLEKHN1Q494U1 663 aaPredicted RBP7.12□□□□□ -1.27
YBX3-209ENST00000540747 DNTTIP2Q5QJE6 756 aaKnown RBP7.12□□□□□ -1.27
YBX3-209ENST00000540747 VWA5B1Q5TIE3 1220 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 METRNLQ641Q3 311 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 SLC9A4Q6AI14 798 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 KLHL35Q6PF15 583 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 SASS6Q6UVJ0 657 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 IGFL3Q6UXB1 125 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 MED25Q71SY5 747 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 AMZ2Q86W34 360 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 TRAPPC5Q8IUR0 188 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 RHOT1Q8IXI2 618 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 TMEM102Q8N9M5 508 aaPredicted RBP7.12□□□□□ -1.27
YBX3-209ENST00000540747 ZFPM2Q8WW38 1151 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 RAPGEF5Q92565 580 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 SYN2Q92777 582 aaPredicted RBP7.12□□□□□ -1.27
YBX3-209ENST00000540747 MR1Q95460 341 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 RNF157Q96PX1 679 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 INSM2Q96T92 566 aaPredicted RBP7.12□□□□□ -1.27
YBX3-209ENST00000540747 MFRPQ9BY79 579 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 CEP41Q9BYV8 373 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 KIR3DX1Q9H7L2 352 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 PCMTD2Q9NV79 361 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 ASF1BQ9NVP2 202 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 SMOXQ9NWM0 555 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 IL17CQ9P0M4 197 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 C5AR2Q9P296 337 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 TRIM10Q9UDY6 481 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 SLC24A2Q9UI40 661 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 POMT2Q9UKY4 750 aa7.12□□□□□ -1.27
YBX3-209ENST00000540747 DNMT3AQ9Y6K1 912 aaPredicted RBP7.12□□□□□ -1.27
YBX3-209ENST00000540747 A0A087X0T9 212 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 LOC285095A0A1B0GVY8 99 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 MYO1FO00160 1098 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 SGTAO43765 313 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 POP7O75817 140 aaKnown RBP7.11□□□□□ -1.27
YBX3-209ENST00000540747 KLF7O75840 302 aaPredicted RBP7.11□□□□□ -1.27
YBX3-209ENST00000540747 LCA5LO95447 670 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 MT-CYBP00156 380 aaPredicted RBP7.11□□□□□ -1.27
YBX3-209ENST00000540747 FAM228BP0C875 321 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 VCLP18206 1134 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 CDK11BP21127 795 aaKnown RBP7.11□□□□□ -1.27
YBX3-209ENST00000540747 KDELR1P24390 212 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 PBX1P40424 430 aa7.11□□□□□ -1.27
YBX3-209ENST00000540747 HALP42357 657 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms