RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 TCN1P20061 433 aaPredicted RBP9.4□□□□□ -0.9
LCOR-209ENST00000540664 HOXA9P31269 272 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 CBSP35520 551 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 BMPR1AP36894 532 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 SLC7A2P52569 658 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 B4GALNT1Q00973 533 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 GBX1Q14549 363 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 LRRC36Q1X8D7 754 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 C18orf21Q32NC0 220 aaPredicted RBP9.4□□□□□ -0.9
LCOR-209ENST00000540664 C6orf136Q5SQH8 315 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 TMEM240Q5SV17 173 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 OR52E8Q6IFG1 317 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 TMEM154Q6P9G4 183 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 APLFQ8IW19 511 aaPredicted RBP9.4□□□□□ -0.9
LCOR-209ENST00000540664 CDYL2Q8N8U2 506 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 NAT14Q8WUY8 206 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 LRCH3Q96II8 777 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 TEX37Q96LM6 180 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 UHRF1Q96T88 793 aaPredicted RBP9.4□□□□□ -0.9
LCOR-209ENST00000540664 TMEM79Q9BSE2 394 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 NSUN3Q9H649 340 aaKnown RBP9.4□□□□□ -0.9
LCOR-209ENST00000540664 SPHK2Q9NRA0 654 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 HEBP1Q9NRV9 189 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 TDP1Q9NUW8 608 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 MARK1Q9P0L2 795 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 CCL27Q9Y4X3 112 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 DOCK6Q96HP0 2047 aa9.4□□□□□ -0.9
LCOR-209ENST00000540664 DPPA5A6NC42 116 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 GRXCR2A6NFK2 248 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 GIPC1O14908 333 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 EEDO75530 441 aaKnown RBP9.4□□□□□ -0.91
LCOR-209ENST00000540664 RFPL2O75678 378 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 RNASEH2AO75792 299 aaKnown RBP9.4□□□□□ -0.91
LCOR-209ENST00000540664 CSPG5O95196 566 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 TRIM16O95361 564 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 OTCP00480 354 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 S100BP04271 92 aaPredicted RBP9.4□□□□□ -0.91
LCOR-209ENST00000540664 CAPN1P07384 714 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 LYNP07948 512 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 RHOP08100 348 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 ITGB6P18564 788 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 SLC6A2P23975 617 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 NME5P56597 212 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 PHKG1Q16816 387 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 SLC5A9Q2M3M2 681 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 ATP13A5Q4VNC0 1218 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 PRSS36Q5K4E3 855 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 CDKL4Q5MAI5 379 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 IL23RQ5VWK5 629 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 SULT1C3Q6IMI6 304 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 LAYNQ6UX15 382 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 UBE2Q1Q7Z7E8 422 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 SPATA24Q86W54 205 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 SLC15A3Q8IY34 581 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 ADGRG2Q8IZP9 1017 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 SFRP1Q8N474 314 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 CATSPER1Q8NEC5 780 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 OR4F6Q8NGB9 312 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 OR2A12Q8NGT7 310 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 SPPL3Q8TCT6 385 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 ZUFSPQ96AP4 578 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 SLCO4A1Q96BD0 722 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 ULK4Q96C45 1275 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 RHBDF1Q96CC6 855 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 SPDL1Q96EA4 605 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 LRGUKQ96M69 825 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 CDK15Q96Q40 435 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 PKP2Q99959 881 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 SLC39A3Q9BRY0 314 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 CD244Q9BZW8 370 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 BRD9Q9H8M2 597 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 TLR9Q9NR96 1032 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 GID8Q9NWU2 228 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 PRKAG2Q9UGJ0 569 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 SLCO3A1Q9UIG8 710 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 CNOT11Q9UKZ1 510 aaKnown RBP9.4□□□□□ -0.91
LCOR-209ENST00000540664 TMPRSS11EQ9UL52 423 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 DTNAQ9Y4J8 743 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 PCDHA9Q9Y5H5 950 aa9.4□□□□□ -0.91
LCOR-209ENST00000540664 TSPAN11A1L157 253 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 EIF4E1BA6NMX2 242 aaKnown RBP9.39□□□□□ -0.91
LCOR-209ENST00000540664 A8MX80 341 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 NEDD8-MDP1E9PL57 170 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 DENRO43583 198 aaKnown RBP9.39□□□□□ -0.91
LCOR-209ENST00000540664 RNASEH1O60930 286 aaKnown RBP9.39□□□□□ -0.91
LCOR-209ENST00000540664 SLC22A3O75751 556 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 VCLP18206 1134 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 MSH3P20585 1137 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 SLC7A1P30825 629 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 SPINT3P49223 89 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 HTR6P50406 440 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 VASPP50552 380 aaPredicted RBP9.39□□□□□ -0.91
LCOR-209ENST00000540664 EMX2Q04743 252 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 RPS6KA2Q15349 733 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 TLR1Q15399 786 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 TTLL9Q3SXZ7 439 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 ARHGAP15Q53QZ3 475 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 RARS2Q5T160 578 aaKnown RBP9.39□□□□□ -0.91
LCOR-209ENST00000540664 PLPP4Q5VZY2 271 aa9.39□□□□□ -0.91
LCOR-209ENST00000540664 TMEM215Q68D42 235 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms