RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 MYOFQ9NZM1 2061 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 H3BNC9 293 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 ARVCFO00192 962 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 NBNO60934 754 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 CAPN15O75808 1086 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 SEC24AO95486 1093 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 PRAMEF1O95521 474 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 LDLRP01130 860 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 IGLV3-27P01718 113 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 CD247P20963 164 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 RPS9P46781 194 aaKnown RBP13.47□□□□□ -0.25
BNIP3-202ENST00000540159 RPL26P61254 145 aaKnown RBP13.47□□□□□ -0.25
BNIP3-202ENST00000540159 HPCAP84074 193 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 GPR17Q13304 367 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 CPSF6Q16630 551 aaKnown RBP eCLIP13.47□□□□□ -0.25
BNIP3-202ENST00000540159 FAM174BQ3ZCQ3 159 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 CYP20A1Q6UW02 462 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 TMEM199Q8N511 208 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 DHRSXQ8N5I4 330 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 GPR150Q8NGU9 434 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 TOP1MTQ969P6 601 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 NCLNQ969V3 563 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 NSMCE2Q96MF7 247 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 STARD7Q9NQZ5 370 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 IRAK4Q9NWZ3 460 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 ATXN10Q9UBB4 475 aa13.47□□□□□ -0.25
BNIP3-202ENST00000540159 FAF1Q9UNN5 650 aaPredicted RBP13.47□□□□□ -0.25
BNIP3-202ENST00000540159 C1orf232A0A0U1RR37 186 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 ATE1O95260 518 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 CLDN7O95471 211 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 RFC2P35250 354 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 SLC26A3P40879 764 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 SUOXP51687 545 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 NEK2P51955 445 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.25
BNIP3-202ENST00000540159 PRKG2Q13237 762 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 ARHGEF7Q14155 803 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 LDLRAP1Q5SW96 308 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 LCN8Q6JVE9 175 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 RNF180Q86T96 592 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 ADGRG2Q8IZP9 1017 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 GAB3Q8WWW8 586 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 ISOC1Q96CN7 298 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 MAGEH1Q9H213 219 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 ASB8Q9H765 288 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 INTS10Q9NVR2 710 aaKnown RBP13.46□□□□□ -0.25
BNIP3-202ENST00000540159 LEF1Q9UJU2 399 aaPredicted RBP13.46□□□□□ -0.25
BNIP3-202ENST00000540159 PKP3Q9Y446 797 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 EOMESO95936 686 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 HSD17B1P14061 328 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 ERVK-8P63133 956 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 TNK2Q07912 1038 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 FGD3Q5JSP0 725 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 SPOUT1Q5T280 376 aaKnown RBP13.46□□□□□ -0.25
BNIP3-202ENST00000540159 CCSAPQ6IQ19 270 aaPredicted RBP13.46□□□□□ -0.25
BNIP3-202ENST00000540159 RFLNAQ6ZTI6 216 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 NKAPQ8N5F7 415 aaKnown RBP13.46□□□□□ -0.25
BNIP3-202ENST00000540159 C9orf16Q9BUW7 83 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 EPB41L1Q9H4G0 881 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 ACTL8Q9H568 366 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 LIMD1Q9UGP4 676 aa13.46□□□□□ -0.25
BNIP3-202ENST00000540159 AQP12BA6NM10 295 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 SLC25A14O95258 325 aaPredicted RBP13.45□□□□□ -0.26
BNIP3-202ENST00000540159 CD160O95971 181 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 CAPNS1P04632 268 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 GJA1P17302 382 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 POLR2IP36954 125 aaKnown RBP13.45□□□□□ -0.26
BNIP3-202ENST00000540159 TTPAP49638 278 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 TPD52P55327 224 aaPredicted RBP13.45□□□□□ -0.26
BNIP3-202ENST00000540159 ESRRGP62508 458 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 GTF2H2Q13888 395 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 HECTD3Q5T447 861 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 GTF2H2CQ6P1K8 395 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 GCNT7Q6ZNI0 430 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 KCTD8Q6ZWB6 473 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 SERPINA9Q86WD7 417 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 AQP12AQ8IXF9 295 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 BPIFB6Q8NFQ5 453 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 TTPALQ9BTX7 342 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 ING2Q9H160 280 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 CXorf21Q9HAI6 301 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 ELOVL2Q9NXB9 296 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 SMPD3Q9NY59 655 aaPredicted RBP13.45□□□□□ -0.26
BNIP3-202ENST00000540159 CNOT11Q9UKZ1 510 aaKnown RBP13.45□□□□□ -0.26
BNIP3-202ENST00000540159 ZNF840PA6NDX5 716 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 OR7A17O14581 309 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 MTX2O75431 263 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 KCNH1O95259 989 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 MATN4O95460 622 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 EPOP01588 193 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 IGHA2P01877 340 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 ATP4BP51164 291 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 CDH4P55283 916 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 SMAD3P84022 425 aaKnown RBP13.45□□□□□ -0.26
BNIP3-202ENST00000540159 CYBRD1Q53TN4 286 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 SPANXN4Q5MJ08 99 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 TRAF7Q6Q0C0 670 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 HACD2Q6Y1H2 254 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 TSPAN33Q86UF1 283 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 APCDD1Q8J025 514 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms