RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 LPOP22079 712 aaPredicted RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 MC4RP32245 332 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 SLC1A2P43004 574 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 TTPAP49638 278 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 YBEYP58557 167 aaPredicted RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 RING1Q06587 406 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 SLC8B1Q6J4K2 584 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 ENDOVQ8N8Q3 282 aaKnown RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 OR7D4Q8NG98 312 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 HSPBAP1Q96EW2 488 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 OXSMQ9NWU1 459 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 TBC1D30Q9Y2I9 924 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 BACE2Q9Y5Z0 518 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 MAP1BP46821 2468 aaKnown RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 TET1Q8NFU7 2136 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 RFXANKO14593 260 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 KLF11O14901 512 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 ALDOAP04075 364 aaKnown RBP9.86□□□□□ -0.83
TRAF1-202ENST00000540010 HDCP19113 662 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 MAPKAPK2P49137 400 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 CASP12Q6UXS9 341 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 KCTD8Q6ZWB6 473 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 ASRGL1Q7L266 308 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 NANOGNBQ7Z5D8 188 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 CENPNQ96H22 339 aaPredicted RBP9.86□□□□□ -0.83
TRAF1-202ENST00000540010 PPP3R2Q96LZ3 170 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 PCDH10Q9P2E7 1040 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 OAZ3Q9UMX2 235 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 SH3GLB1Q9Y371 365 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 TCAF1Q9Y4C2 921 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 PNMA8CA0A1B0GUJ8 204 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 IQCF5A8MTL0 148 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 COCHO43405 550 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 DLX3O60479 287 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 DGKAP23743 735 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 POLR2JP52435 117 aaKnown RBP9.86□□□□□ -0.83
TRAF1-202ENST00000540010 DEFB103AP81534 67 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 SMAD3P84022 425 aaKnown RBP9.86□□□□□ -0.83
TRAF1-202ENST00000540010 CLCQ05315 142 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 IL10RBQ08334 325 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 TSNQ15631 228 aaKnown RBP9.86□□□□□ -0.83
TRAF1-202ENST00000540010 POM121L1PQ3SYA9 428 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 CGB2Q6NT52 195 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 FAM151BQ6UXP7 276 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 ANKRD46Q86W74 232 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 RAB42Q8N4Z0 105 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 TMEM199Q8N511 208 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 CLSTN3Q9BQT9 956 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 TRIM39Q9HCM9 518 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 IKZF3Q9UKT9 509 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 PCDHGC4Q9Y5F7 938 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 ZCWPW2A0A1B0GU75 182 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 ZNF840PA6NDX5 716 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 FAM220BPB1ANY3 271 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 FAM25AB3EWG3 89 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 FAM25CB3EWG5 89 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 FAM25GB3EWG6 89 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 OR4F21O95013 312 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 FADS2O95864 444 aaKnown RBP9.86□□□□□ -0.83
TRAF1-202ENST00000540010 LRG1P02750 347 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 AHSGP02765 367 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 T-ENOLP0DO92 83 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 KRT20P35900 424 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 MTTPP55157 894 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 GNA12Q03113 381 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 PCLAFQ15004 111 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 TPGS2Q68CL5 300 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 ZNF549Q6P9A3 640 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 XKR5Q6UX68 686 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 TIFABQ6ZNK6 161 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 FAM43BQ6ZT52 329 aaPredicted RBP9.86□□□□□ -0.83
TRAF1-202ENST00000540010 MCFD2Q8NI22 146 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 DEPDC7Q96QD5 511 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 TMEM106CQ9BVX2 250 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 CHID1Q9BWS9 393 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 OSGEPL1Q9H4B0 414 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 AMBNQ9NP70 447 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 PLK2Q9NYY3 685 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 SIRPGQ9P1W8 387 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 SHROOM3Q8TF72 1996 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 H3BNX3 289 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 J3QRK9 145 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 IFNA14P01570 189 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 CNPP09543 421 aaKnown RBP9.86□□□□□ -0.83
TRAF1-202ENST00000540010 MTPNP58546 118 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 ATP6V0D1P61421 351 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 PRKCQQ04759 706 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 BNIP3Q12983 259 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 MED22Q15528 200 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 THAP5Q7Z6K1 395 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 PDSS2Q86YH6 399 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 ZC3H7AQ8IWR0 971 aaKnown RBP9.86□□□□□ -0.83
TRAF1-202ENST00000540010 FBXL8Q96CD0 374 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 MRGPRX2Q96LB1 330 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 CYP2S1Q96SQ9 504 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 FEM1AQ9BSK4 669 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 OSBPL6Q9BZF3 934 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 C11orf49Q9H6J7 331 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 FBRSL1Q9HCM7 1045 aaKnown RBP9.86□□□□□ -0.83
TRAF1-202ENST00000540010 IL37Q9NZH6 218 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms