RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 ZNF549Q6P9A3 640 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 TMEM220Q6QAJ8 160 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 PAQR3Q6TCH7 311 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 LDB1Q86U70 411 aaPredicted RBP11.6□□□□□ -0.55
VTN-202ENST00000539746 FAM124AQ86V42 546 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 CACUL1Q86Y37 369 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 FSTL5Q8N475 847 aaPredicted RBP11.6□□□□□ -0.55
VTN-202ENST00000539746 FBXO39Q8N4B4 442 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 TP53I13Q8NBR0 393 aaPredicted RBP11.6□□□□□ -0.55
VTN-202ENST00000539746 FBXO15Q8NCQ5 510 aaPredicted RBP11.6□□□□□ -0.55
VTN-202ENST00000539746 C7orf26Q96N11 449 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 KLF6Q99612 283 aaPredicted RBP11.6□□□□□ -0.55
VTN-202ENST00000539746 APOOQ9BUR5 198 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 OR2AG1Q9H205 316 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 CAB39LQ9H9S4 337 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 PARVBQ9HBI1 364 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 SPATA6Q9NWH7 488 aaPredicted RBP11.6□□□□□ -0.55
VTN-202ENST00000539746 OXSMQ9NWU1 459 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 SIRPGQ9P1W8 387 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 XPR1Q9UBH6 696 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 VTI1BQ9UEU0 232 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 POLG2Q9UHN1 485 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 MUTYHQ9UIF7 546 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 FBXO4Q9UKT5 387 aa11.6□□□□□ -0.55
VTN-202ENST00000539746 A0A1W2PPC4 97 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 PRR23AA6NEV1 266 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 OR5K4A6NMS3 321 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 FADS2P1A8MWK0 482 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 SUPT3HB4E1H0 165 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 CHUKO15111 745 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 INPP4BO15327 924 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 ZW10O43264 779 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 SPINT1O43278 529 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 NIPSNAP2O75323 286 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 SUPT3HO75486 399 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 FSBPO95073 299 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 FAM107AO95990 144 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 IDSP22304 550 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 HOXD12P35452 270 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 CLCNKAP51800 687 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 GUCY1A3Q02108 690 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 HSPA14Q0VDF9 509 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 ILF3Q12906 894 aaKnown RBP eCLIP11.59□□□□□ -0.55
VTN-202ENST00000539746 CDC16Q13042 620 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 PRKAA1Q13131 559 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 BOP1Q14137 746 aaKnown RBP11.59□□□□□ -0.55
VTN-202ENST00000539746 NAA25Q14CX7 972 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 TECRLQ5HYJ1 363 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 SEL1L3Q68CR1 1132 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 Q6ZS52 159 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 ADGRG6Q86SQ4 1221 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 CEP97Q8IW35 865 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 SLC22A15Q8IZD6 547 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 SIDT2Q8NBJ9 832 aaKnown RBP11.59□□□□□ -0.55
VTN-202ENST00000539746 OR56A4Q8NGH8 313 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 KCTD4Q8WVF5 259 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 NXNL1Q96CM4 212 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 UHRF1Q96T88 793 aaPredicted RBP11.59□□□□□ -0.55
VTN-202ENST00000539746 OLFM1Q99784 485 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 TRIM55Q9BYV6 548 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 FOXQ1Q9C009 403 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 ILKAPQ9H0C8 392 aaPredicted RBP11.59□□□□□ -0.55
VTN-202ENST00000539746 TRNAU1APQ9NX07 287 aaKnown RBP11.59□□□□□ -0.55
VTN-202ENST00000539746 CD274Q9NZQ7 290 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 SLC17A6Q9P2U8 582 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 CYP8B1Q9UNU6 501 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 SLC17A4Q9Y2C5 497 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 OARD1Q9Y530 152 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 COLEC10Q9Y6Z7 277 aa11.59□□□□□ -0.55
VTN-202ENST00000539746 NDUFAB1O14561 156 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 SLC31A1O15431 190 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 YKT6O15498 198 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 DFNA5O60443 496 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 RASGRP1O95267 797 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 HSPA4LO95757 839 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 IMPDH1P20839 514 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 CDKN1CP49918 316 aaPredicted RBP11.58□□□□□ -0.56
VTN-202ENST00000539746 HERVK_113P63132 956 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 RACK1P63244 317 aaKnown RBP11.58□□□□□ -0.56
VTN-202ENST00000539746 ARHGAP8P85298 464 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 CTBSQ01459 385 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 RPL6Q02878 288 aaKnown RBP11.58□□□□□ -0.56
VTN-202ENST00000539746 DMTNQ08495 405 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 ARHGAP19Q14CB8 494 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 SMAD1Q15797 465 aaKnown RBP11.58□□□□□ -0.56
VTN-202ENST00000539746 ZNF528Q3MIS6 628 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 ANKS6Q68DC2 871 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 WDR5BQ86VZ2 330 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 LONP2Q86WA8 852 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 RBM12BQ8IXT5 1001 aaKnown RBP11.58□□□□□ -0.56
VTN-202ENST00000539746 CPNE9Q8IYJ1 553 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 CENPLQ8N0S6 344 aaPredicted RBP11.58□□□□□ -0.56
VTN-202ENST00000539746 CLDN19Q8N6F1 224 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 RASGEF1AQ8N9B8 481 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 MFSD2AQ8NA29 543 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 ZFPM2Q8WW38 1151 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 ZNF75CPQ92670 426 aaPredicted RBP11.58□□□□□ -0.56
VTN-202ENST00000539746 SGF29Q96ES7 293 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 KLHDC7BQ96G42 594 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 CCDC138Q96M89 665 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms