RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 EGFL8Q99944 293 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 HOPXQ9BPY8 73 aaPredicted RBP10.02□□□□□ -0.81
SPARC-209ENST00000539687 SPATA16Q9BXB7 569 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 LINC00597Q9H2U6 94 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 WDR41Q9HAD4 459 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 SEMA4BQ9NPR2 832 aaPredicted RBP10.02□□□□□ -0.81
SPARC-209ENST00000539687 ELOVL2Q9NXB9 296 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 WWOXQ9NZC7 414 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 OPTCQ9UBM4 332 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 POLG2Q9UHN1 485 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 SLCO3A1Q9UIG8 710 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 MSRAQ9UJ68 235 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 WASF2Q9Y6W5 498 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 C1QTNF3-AMACRE9PGA6 284 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 SLC28A1O00337 649 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 NRG2O14511 850 aaPredicted RBP10.01□□□□□ -0.81
SPARC-209ENST00000539687 PIP5K1BO14986 540 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 PER2O15055 1255 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 NPC1O15118 1278 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 NRP2O60462 931 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 TULP3O75386 442 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 JUNP05412 331 aaKnown RBP10.01□□□□□ -0.81
SPARC-209ENST00000539687 EBLN1P0CF75 366 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 SYN1P17600 705 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 GNAZP19086 355 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 ME2P23368 584 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 ITGB7P26010 798 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 PSMD8P48556 350 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 ERVK-8P63133 956 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 ZNF33BQ06732 778 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 GTF2H2Q13888 395 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 ELAVL3Q14576 367 aaKnown RBP10.01□□□□□ -0.81
SPARC-209ENST00000539687 PPP1R3AQ16821 1122 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 MAP7D1Q3KQU3 841 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 ATP13A5Q4VNC0 1218 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 AGKQ53H12 422 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 ARSIQ5FYB1 569 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 CLEC6AQ6EIG7 209 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 GTF2H2CQ6P1K8 395 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 PRR23BQ6ZRT6 265 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 NLRP8Q86W28 1048 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 TMEM126BQ8IUX1 230 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 NPAS3Q8IXF0 933 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 DEFB123Q8N688 67 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 PNPLA1Q8N8W4 532 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 CHST14Q8NCH0 376 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 ITFG1Q8TB96 612 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 WDR60Q8WVS4 1066 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 ASZ1Q8WWH4 475 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 ING5Q8WYH8 240 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 RAB7BQ96AH8 199 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 RCN3Q96D15 328 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 PPP3R2Q96LZ3 170 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 SLC30A3Q99726 388 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 BOCQ9BWV1 1114 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 MFRPQ9BY79 579 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 SLC29A3Q9BZD2 475 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 EPHX3Q9H6B9 360 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 AKTIPQ9H8T0 292 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 PCDH12Q9NPG4 1184 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 DYRK4Q9NR20 520 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 SDR39U1Q9NRG7 319 aaPredicted RBP10.01□□□□□ -0.81
SPARC-209ENST00000539687 GID8Q9NWU2 228 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 SUN2Q9UH99 717 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 TRPS1Q9UHF7 1281 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 EIF2B4Q9UI10 523 aaKnown RBP10.01□□□□□ -0.81
SPARC-209ENST00000539687 PTBP2Q9UKA9 531 aaKnown RBP10.01□□□□□ -0.81
SPARC-209ENST00000539687 SARDHQ9UL12 918 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 MTF2Q9Y483 593 aaPredicted RBP10.01□□□□□ -0.81
SPARC-209ENST00000539687 SCN8AQ9UQD0 1980 aa10.01□□□□□ -0.81
SPARC-209ENST00000539687 ALPK3Q96L96 1907 aa10□□□□□ -0.81
SPARC-209ENST00000539687 C15orf38-AP3S2A0A0A6YYH1 394 aa10□□□□□ -0.81
SPARC-209ENST00000539687 NCF1BA6NI72 391 aaPredicted RBP10□□□□□ -0.81
SPARC-209ENST00000539687 IQCF5A8MTL0 148 aa10□□□□□ -0.81
SPARC-209ENST00000539687 NCF1CA8MVU1 366 aaPredicted RBP10□□□□□ -0.81
SPARC-209ENST00000539687 TTC34A8MYJ7 566 aa10□□□□□ -0.81
SPARC-209ENST00000539687 K7EPI3 171 aa10□□□□□ -0.81
SPARC-209ENST00000539687 TRIM38O00635 465 aa10□□□□□ -0.81
SPARC-209ENST00000539687 MRASO14807 208 aa10□□□□□ -0.81
SPARC-209ENST00000539687 WNT9AO14904 365 aa10□□□□□ -0.81
SPARC-209ENST00000539687 ANGPT2O15123 496 aa10□□□□□ -0.81
SPARC-209ENST00000539687 MAP3K7O43318 606 aa10□□□□□ -0.81
SPARC-209ENST00000539687 RGS14O43566 566 aa10□□□□□ -0.81
SPARC-209ENST00000539687 NPPAP01160 153 aa10□□□□□ -0.81
SPARC-209ENST00000539687 ELFN1P0C7U0 828 aa10□□□□□ -0.81
SPARC-209ENST00000539687 PRR35P0CG20 571 aa10□□□□□ -0.81
SPARC-209ENST00000539687 HGFP14210 728 aa10□□□□□ -0.81
SPARC-209ENST00000539687 NCF1P14598 390 aaPredicted RBP10□□□□□ -0.81
SPARC-209ENST00000539687 TIMP2P16035 220 aa10□□□□□ -0.81
SPARC-209ENST00000539687 EPB42P16452 691 aa10□□□□□ -0.81
SPARC-209ENST00000539687 GM2AP17900 193 aa10□□□□□ -0.81
SPARC-209ENST00000539687 UGT1A6P19224 532 aa10□□□□□ -0.81
SPARC-209ENST00000539687 UGT1A1P22309 533 aa10□□□□□ -0.81
SPARC-209ENST00000539687 UGT1A4P22310 534 aa10□□□□□ -0.81
SPARC-209ENST00000539687 AOAHP28039 575 aa10□□□□□ -0.81
SPARC-209ENST00000539687 HMOX2P30519 316 aa10□□□□□ -0.81
SPARC-209ENST00000539687 UGT1A3P35503 534 aa10□□□□□ -0.81
SPARC-209ENST00000539687 UGT1A5P35504 534 aa10□□□□□ -0.81
SPARC-209ENST00000539687 GGT5P36269 586 aa10□□□□□ -0.81
SPARC-209ENST00000539687 NRIP1P48552 1158 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms