RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 OR52E4Q8NGH9 312 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 EEF1AKMT1Q8WVE0 214 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 ESAMQ96AP7 390 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 SDCCAG3Q96C92 435 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 FBXL8Q96CD0 374 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 ITPKCQ96DU7 683 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 ZNF347Q96SE7 839 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 MBOAT4Q96T53 435 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 ABI2Q9NYB9 513 aaPredicted RBP9.54□□□□□ -0.88
CDH13-204ENST00000539548 SELENONQ9NZV5 590 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 RNF181Q9P0P0 153 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 EIF2B4Q9UI10 523 aaKnown RBP9.54□□□□□ -0.88
CDH13-204ENST00000539548 TRMT6Q9UJA5 497 aaKnown RBP9.54□□□□□ -0.88
CDH13-204ENST00000539548 BLOC1S6Q9UL45 172 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 PAIP2BQ9ULR5 123 aaKnown RBP9.54□□□□□ -0.88
CDH13-204ENST00000539548 PDE10AQ9Y233 779 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 PCDHGA8Q9Y5G5 932 aa9.54□□□□□ -0.88
CDH13-204ENST00000539548 C1orf232A0A0U1RR37 186 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 C2orf81A6NN90 581 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 F8W810 466 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 PFDN6O15212 129 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 TBX18O95935 607 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 IGLV3-27P01718 113 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 HTR1AP08908 422 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 PCNAP12004 261 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 JAK1P23458 1154 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 NFKBIAP25963 317 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 MLLT10P55197 1068 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 PPP2R2BQ00005 443 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 GNA12Q03113 381 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 BFSP2Q13515 415 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 KIAA0040Q15053 153 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 GDF6Q6KF10 455 aaPredicted RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 CIR1Q86X95 450 aaPredicted RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 GALNT13Q8IUC8 556 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 SIDT2Q8NBJ9 832 aaKnown RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 MDGA1Q8NFP4 955 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 ABHD11Q8NFV4 315 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 METTL6Q8TCB7 284 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 MUL1Q969V5 352 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 FUBP3Q96I24 572 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDH13-204ENST00000539548 MGME1Q9BQP7 344 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 NEURL2Q9BR09 285 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 BEGAINQ9BUH8 593 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 OLA1Q9NTK5 396 aaKnown RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 PADI3Q9ULW8 664 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 NEUROG3Q9Y4Z2 214 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 ASB1Q9Y576 335 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 FAM92AA1XBS5 289 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 LSM1O15116 133 aaKnown RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 GSTA4O15217 222 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 NIPSNAP2O75323 286 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 BCAS1O75363 584 aaPredicted RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 OAZ2O95190 189 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 KCNH1O95259 989 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 CAPN1P07384 714 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 IL7RP16871 459 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 ITIH1P19827 911 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 CD52P31358 61 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 TTPAP49638 278 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 GPR15P49685 360 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 CDKN1CP49918 316 aaPredicted RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 CLCN4P51793 760 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 DGKQP52824 942 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 ITGADQ13349 1161 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 ATP1A4Q13733 1029 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 ZNF846Q147U1 533 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 PCBP2Q15366 365 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDH13-204ENST00000539548 NFE2Q16621 373 aaPredicted RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 CCL14Q16627 93 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 MEP1AQ16819 746 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 CTSL3PQ5NE16 218 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 EGFLAMQ63HQ2 1017 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 LETMD1Q6P1Q0 360 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 IL27RAQ6UWB1 636 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 LINC00299Q6ZSB3 139 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 SLC16A12Q6ZSM3 486 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 SERINC5Q86VE9 423 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 IGFN1Q86VF2 1251 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 TTC30BQ8N4P2 665 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 CHCHD4Q8N4Q1 142 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 OR2T12Q8NG77 320 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 OR52B6Q8NGF0 335 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 CD200R1Q8TD46 325 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 GIPC2Q8TF65 315 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 SGCDQ92629 289 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 LINGO1Q96FE5 620 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 NSMCE3Q96MG7 304 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 RBM4BQ9BQ04 359 aaKnown RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 RBM4Q9BWF3 364 aaKnown RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 FUNDC2Q9BWH2 189 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 AMBRA1Q9C0C7 1298 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 CARS2Q9HA77 564 aaKnown RBP9.53□□□□□ -0.88
CDH13-204ENST00000539548 SMURF2Q9HAU4 748 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDH13-204ENST00000539548 NUDT4Q9NZJ9 180 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 MARCH2Q9P0N8 246 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 NAALAD2Q9Y3Q0 740 aa9.53□□□□□ -0.88
CDH13-204ENST00000539548 COMMD10Q9Y6G5 202 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms