RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 OR5K4A6NMS3 321 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 PRMT5O14744 637 aaPredicted RBP17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 CDK4P11802 303 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 RPS3P23396 243 aaKnown RBP eCLIP17.04■□□□□ 0.322e-9■■■■□ 21.4
SLC3A2-213ENST00000539458 MAZP56270 477 aaKnown RBP17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 FOXC1Q12948 553 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 FRG1Q14331 258 aaKnown RBP17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 NFE2L1Q14494 772 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 ZNF658BQ4V348 819 aaPredicted RBP17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 IYDQ6PHW0 289 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 ABRAXAS1Q6UWZ7 409 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 SLCO6A1Q86UG4 719 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 SFRP1Q8N474 314 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 ARL14Q8N4G2 192 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 GABPB2Q8TAK5 448 aaPredicted RBP17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 IFI44Q8TCB0 444 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 MAPK15Q8TD08 544 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 PATE1Q8WXA2 126 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 CERS2Q96G23 380 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 SAYSD1Q9NPB0 183 aa17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 INTS10Q9NVR2 710 aaKnown RBP17.04■□□□□ 0.32
SLC3A2-213ENST00000539458 KIR2DS5A0A0G2JLQ3 304 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 A0A0G2JNG1 304 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 PDZK1P1A8MUH7 402 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 KIR2DS3K7RE56 304 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 NUDT21O43809 227 aaKnown RBP17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 GLB1P16278 677 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 ADARP55265 1226 aaKnown RBP17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 KIR2DS5Q14953 304 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 SEPT7Q16181 437 aaKnown RBP17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 HSP90AA5PQ58FG0 334 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 METRNLQ641Q3 311 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 XKR5Q6UX68 686 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 UNQ6494/PRO21346Q6UXR6 183 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 EFL1Q7Z2Z2 1120 aaKnown RBP17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 UNC5BQ8IZJ1 945 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 SLC37A2Q8TED4 501 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 PYROXD1Q8WU10 500 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 LPGAT1Q92604 370 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 TSSK1BQ9BXA7 367 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 GNPTGQ9UJJ9 305 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 ACSL5Q9ULC5 683 aa17.03■□□□□ 0.32
SLC3A2-213ENST00000539458 UBA6A0AVT1 1052 aaPredicted RBP17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 S1PR4O95977 384 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 ERVK-10P10266 1014 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 BRAFP15056 766 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 PNLIPP16233 465 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 RPL10P27635 214 aaKnown RBP17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 HALP42357 657 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 SLC1A2P43004 574 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 FASLGP48023 281 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 CTBP1Q13363 440 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 PERM1Q5SV97 790 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 SLC9B2Q86UD5 537 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 DENND6AQ8IWF6 608 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 CNTN4Q8IWV2 1026 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 CFAP206Q8IYR0 622 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 AVL9Q8NBF6 648 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 LRRN4CLQ8ND94 238 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 GSDMBQ8TAX9 411 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 CCDC74AQ96AQ1 378 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 STN1Q9H668 368 aaKnown RBP17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 COG4Q9H9E3 785 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 SARS2Q9NP81 518 aaKnown RBP17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 IARS2Q9NSE4 1012 aaKnown RBP17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 SCHIP1Q9P0W5 487 aaPredicted RBP17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 LRIT1Q9P2V4 623 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 FAM8A1Q9UBU6 413 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 PCDHB1Q9Y5F3 818 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 RNF215Q9Y6U7 377 aa17.02■□□□□ 0.32
SLC3A2-213ENST00000539458 ZFC3H1O60293 1989 aaKnown RBP17.02■□□□□ 0.31
SLC3A2-213ENST00000539458 TRBV23OR9-2A0A075B6M9 112 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 LIN7AO14910 233 aaPredicted RBP17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 TRIM16O95361 564 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 ESR1P03372 595 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 TUBBP07437 444 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 XRCC1P18887 633 aaPredicted RBP17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 EIF3BP55884 814 aaKnown RBP17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 E2F1Q01094 437 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 RPA4Q13156 261 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 BIRC2Q13490 618 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 NR1D2Q14995 579 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 CCDC157Q569K6 752 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 PTRHD1Q6GMV3 140 aaKnown RBP17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 ZNF438Q7Z4V0 828 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 CCDC25Q86WR0 208 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 LILRA3Q8N6C8 439 aaPredicted RBP17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 C2CD4AQ8NCU7 369 aaPredicted RBP17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 ADAMTS14Q8WXS8 1223 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 IFT81Q8WYA0 676 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 ELMO1Q92556 727 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 BIRC8Q96P09 236 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 PANX3Q96QZ0 392 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 CCDC3Q9BQI4 270 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 PPANQ9NQ55 473 aaKnown RBP17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 MTRF1LQ9UGC7 380 aaKnown RBP17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 FBXO5Q9UKT4 447 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 PSMD13Q9UNM6 376 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 WDR37Q9Y2I8 494 aa17.01■□□□□ 0.31
SLC3A2-213ENST00000539458 CABIN1Q9Y6J0 2220 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms