RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 TMEM220Q6QAJ8 160 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 RAPH1Q70E73 1250 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 SRRM1Q8IYB3 904 aaKnown RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 UNC5BQ8IZJ1 945 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 NKAPQ8N5F7 415 aaKnown RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 OR13H1Q8NG92 308 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 HM13Q8TCT9 377 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 ACMSDQ8TDX5 336 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 TMEM159Q96B96 161 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 ELMO2Q96JJ3 720 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 LINC00615Q96LM1 132 aaPredicted RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 FOPNLQ96NB1 174 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 ZNF317Q96PQ6 595 aaPredicted RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 OR2M4Q96R27 311 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 GPR22Q99680 433 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 GSDMCQ9BYG8 508 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 P2RY12Q9H244 342 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 VPS11Q9H270 941 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 CARS2Q9HA77 564 aaKnown RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 EVA1BQ9NVM1 165 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 MKS1Q9NXB0 559 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 MARCH4Q9P2E8 410 aaPredicted RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 ATXN10Q9UBB4 475 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 SPASTQ9UBP0 616 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 ACSL5Q9ULC5 683 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 CNOT6Q9ULM6 557 aaKnown RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 DOLKQ9UPQ8 538 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 LRP4O75096 1905 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 FAM95CA0A1B0GW59 222 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 A0A1W2PR77 199 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 IFRD1O00458 451 aaPredicted RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 DNAJC6O75061 913 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 TRIM16O95361 564 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 MPOP05164 745 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 CEACAM5P06731 702 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 VIMP08670 466 aaKnown RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 COL6A2P12110 1019 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 ALDH3A1P30838 453 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 MPLP40238 635 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 HALP42357 657 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 CSNK1EP49674 416 aaKnown RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 CDKN1CP49918 316 aaPredicted RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 CLCNKAP51800 687 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 HK3P52790 923 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 NXPH1P58417 271 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 MPP1Q00013 466 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 SRSF5Q13243 272 aaKnown RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 HHATQ5VTY9 493 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 KLC3Q6P597 504 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 TTC23LQ6PF05 361 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 SLC23A3Q6PIS1 610 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 CNSTQ6PJW8 725 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 CCDC121Q6ZUS5 278 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 PIGWQ7Z7B1 504 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 TBC1D1Q86TI0 1168 aaPredicted RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 ALYREFQ86V81 257 aaKnown RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 GKN2Q86XP6 184 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 HID1Q8IV36 788 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 RASGEF1AQ8N9B8 481 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 PHC3Q8NDX5 983 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 OR2L2Q8NH16 312 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 C1orf216Q8TAB5 229 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 RAB3IL1Q8TBN0 382 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 ELMO1Q92556 727 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 INPP5DQ92835 1189 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 MRRFQ96E11 262 aaKnown RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 SGF29Q96ES7 293 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 SCARF2Q96GP6 870 aaPredicted RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 ORAI3Q9BRQ5 295 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 AARSD1Q9BTE6 412 aaKnown RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 IQCGQ9H095 443 aaKnown RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 STN1Q9H668 368 aaKnown RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 EBF2Q9HAK2 575 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 PLAC1Q9HBJ0 212 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 CYP4F12Q9HCS2 524 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 LATS2Q9NRM7 1088 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 GPR27Q9NS67 375 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 DNAJC28Q9NX36 388 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 IL1RAPL1Q9NZN1 696 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 NCDNQ9UBB6 729 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 APOBEC3BQ9UH17 382 aaKnown RBP10.07□□□□□ -0.8
CLPB-210ENST00000539148 SLC39A10Q9ULF5 831 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 ANKRD6Q9Y2G4 727 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 TMEM98Q9Y2Y6 226 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 GPSM3Q9Y4H4 160 aa10.07□□□□□ -0.8
CLPB-210ENST00000539148 A0A087X1B8 175 aa10.06□□□□□ -0.8
CLPB-210ENST00000539148 TMEM202A6NGA9 273 aa10.06□□□□□ -0.8
CLPB-210ENST00000539148 OR2AG2A6NM03 316 aa10.06□□□□□ -0.8
CLPB-210ENST00000539148 OR5K4A6NMS3 321 aa10.06□□□□□ -0.8
CLPB-210ENST00000539148 CXorf49A8MYA2 514 aaPredicted RBP10.06□□□□□ -0.8
CLPB-210ENST00000539148 H0Y8X5 98 aa10.06□□□□□ -0.8
CLPB-210ENST00000539148 ZW10O43264 779 aa10.06□□□□□ -0.8
CLPB-210ENST00000539148 POP7O75817 140 aaKnown RBP10.06□□□□□ -0.8
CLPB-210ENST00000539148 CSF2P04141 144 aa10.06□□□□□ -0.8
CLPB-210ENST00000539148 SLC35G4P0C7Q5 338 aa10.06□□□□□ -0.8
CLPB-210ENST00000539148 ALPPL2P10696 532 aa10.06□□□□□ -0.8
CLPB-210ENST00000539148 NME1P15531 152 aaKnown RBP10.06□□□□□ -0.8
CLPB-210ENST00000539148 ZNF8P17098 575 aaPredicted RBP10.06□□□□□ -0.8
CLPB-210ENST00000539148 JUNDP17535 347 aa10.06□□□□□ -0.8
CLPB-210ENST00000539148 SAT1P21673 171 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms