RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 FSD1LQ9BXM9 530 aa12.24□□□□□ -0.45
VAMP1-206ENST00000538970 PDE7BQ9NP56 450 aa12.24□□□□□ -0.45
VAMP1-206ENST00000538970 IMP3Q9NV31 184 aaKnown RBP12.24□□□□□ -0.45
VAMP1-206ENST00000538970 RSPH14Q9UHP6 348 aa12.24□□□□□ -0.45
VAMP1-206ENST00000538970 KCND3Q9UK17 655 aa12.24□□□□□ -0.45
VAMP1-206ENST00000538970 TRHDEQ9UKU6 1024 aa12.24□□□□□ -0.45
VAMP1-206ENST00000538970 TP53TG5Q9Y2B4 290 aa12.24□□□□□ -0.45
VAMP1-206ENST00000538970 PKP3Q9Y446 797 aa12.24□□□□□ -0.45
VAMP1-206ENST00000538970 PCDHB3Q9Y5E6 796 aa12.24□□□□□ -0.45
VAMP1-206ENST00000538970 PCDHGA6Q9Y5G7 932 aa12.24□□□□□ -0.45
VAMP1-206ENST00000538970 DNMT3AQ9Y6K1 912 aaPredicted RBP12.24□□□□□ -0.45
VAMP1-206ENST00000538970 USP9YO00507 2555 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-206ENST00000538970 BLACEA4D250 179 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 OR5K3A6NET4 321 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 KATNA1O75449 491 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 ZRANB2O95218 330 aaKnown RBP eCLIP12.23□□□□□ -0.45
VAMP1-206ENST00000538970 PRAMEF1O95521 474 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 MT-ND3P03897 115 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 CCNYL3P0C7X3 344 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 FOLR1P15328 257 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 PBLDP30039 288 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-206ENST00000538970 AKT1P31749 480 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 DNASE1L3Q13609 305 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 ERV3-1Q14264 604 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 KCNAB1Q14722 419 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 PTPRCAPQ14761 206 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 PLCL1Q15111 1095 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 LONRF2Q1L5Z9 754 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 FNBP1LQ5T0N5 605 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 METRNLQ641Q3 311 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 PWWP2BQ6NUJ5 590 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 C11orf63Q6NUN7 778 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 BBS12Q6ZW61 710 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 TMEM135Q86UB9 458 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 KMT5CQ86Y97 462 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 CCDC50Q8IVM0 306 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 RCOR2Q8IZ40 523 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 BEND7Q8N7W2 519 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-206ENST00000538970 SIDT2Q8NBJ9 832 aaKnown RBP12.23□□□□□ -0.45
VAMP1-206ENST00000538970 CT55Q8WUE5 264 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 RBM41Q96IZ5 413 aaKnown RBP12.23□□□□□ -0.45
VAMP1-206ENST00000538970 ZNF514Q96K75 400 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-206ENST00000538970 CD180Q99467 661 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 MAP3K3Q99759 626 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 FICDQ9BVA6 458 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 GBA3Q9H227 469 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 LHX9Q9NQ69 397 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 RARRES3Q9UL19 164 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 PADI1Q9ULC6 663 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 POLHQ9Y253 713 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 ARL5AQ9Y689 179 aa12.23□□□□□ -0.45
VAMP1-206ENST00000538970 ANKRD17O75179 2603 aaKnown RBP12.23□□□□□ -0.45
VAMP1-206ENST00000538970 SPENQ96T58 3664 aaKnown RBP12.22□□□□□ -0.45
VAMP1-206ENST00000538970 CDC14CA4D256 554 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 MGAT4DA6NG13 374 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 TLCD2A6NGC4 264 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 C21orf140B9A014 251 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 APOC4-APOC2K7ER74 178 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 STX7O15400 261 aaKnown RBP12.22□□□□□ -0.45
VAMP1-206ENST00000538970 CREG1O75629 220 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 LCA5LO95447 670 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 RECKO95980 971 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 AGTP01019 485 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 APOC2P02655 101 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 EBLN1P0CF75 366 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 NR1D1P20393 614 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 MSH3P20585 1137 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 RBL1P28749 1068 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 MAGEA1P43355 309 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 PMS2P54278 862 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 ACY1Q03154 408 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 XRCC4Q13426 336 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 DNTTIP2Q5QJE6 756 aaKnown RBP12.22□□□□□ -0.45
VAMP1-206ENST00000538970 TCTN3Q6NUS6 607 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 DUS1LQ6P1R4 473 aaKnown RBP12.22□□□□□ -0.45
VAMP1-206ENST00000538970 CERS6Q6ZMG9 384 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 DET1Q7L5Y6 550 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 RNF214Q8ND24 703 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 OR2L2Q8NH16 312 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 ZNF398Q8TD17 642 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 NAT14Q8WUY8 206 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 KRT35Q92764 455 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 FCRL4Q96PJ5 515 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 INSM2Q96T92 566 aaPredicted RBP12.22□□□□□ -0.45
VAMP1-206ENST00000538970 HEMGNQ9BXL5 484 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 TWSG1Q9GZX9 223 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 WWP1Q9H0M0 922 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 TSPY26PQ9H489 355 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 C10orf88Q9H8K7 445 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 TFR2Q9UP52 801 aa12.22□□□□□ -0.45
VAMP1-206ENST00000538970 CFAP20Q9Y6A4 193 aaKnown RBP12.22□□□□□ -0.45
VAMP1-206ENST00000538970 KLHL33A6NCF5 533 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 MKRN2OSH3BPM6 223 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 K7EM74 188 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 SGTAO43765 313 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 RFPL1O75677 317 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 KRT38O76015 456 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 ANXA9O76027 345 aa12.21□□□□□ -0.45
VAMP1-206ENST00000538970 SRP72O76094 671 aaKnown RBP12.21□□□□□ -0.45
VAMP1-206ENST00000538970 LPOP22079 712 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms