RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 VCLP18206 1134 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 MGAT1P26572 445 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 RPL10P27635 214 aaKnown RBP13.43□□□□□ -0.26
CD9-208ENST00000538834 AKT1P31749 480 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 NSG1P42857 185 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 LMAN1P49257 510 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 INHBCP55103 352 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 ERVPABLB-1P60509 514 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 EIF3IQ13347 325 aaKnown RBP13.43□□□□□ -0.26
CD9-208ENST00000538834 TRA2AQ13595 282 aaKnown RBP eCLIP13.43□□□□□ -0.26
CD9-208ENST00000538834 RPE65Q16518 533 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 ZRANB3Q5FWF4 1079 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 LYPLAL1Q5VWZ2 237 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 TMEM71Q6P5X7 295 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 ARHGAP22Q7Z5H3 698 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 CLEC14AQ86T13 490 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 PIM3Q86V86 326 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 MPP5Q8N3R9 675 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 LILRA3Q8N6C8 439 aaPredicted RBP13.43□□□□□ -0.26
CD9-208ENST00000538834 CLDN19Q8N6F1 224 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 Q8N9G6 341 aaPredicted RBP13.43□□□□□ -0.26
CD9-208ENST00000538834 GPR150Q8NGU9 434 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 WDR36Q8NI36 951 aaKnown RBP13.43□□□□□ -0.26
CD9-208ENST00000538834 SNIP1Q8TAD8 396 aaKnown RBP13.43□□□□□ -0.26
CD9-208ENST00000538834 HM13Q8TCT9 377 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 ZFPM2Q8WW38 1151 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 ZCCHC14Q8WYQ9 949 aaKnown RBP13.43□□□□□ -0.26
CD9-208ENST00000538834 TMEM159Q96B96 161 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 SERPINB12Q96P63 405 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 CCM2Q9BSQ5 444 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.43□□□□□ -0.26
CD9-208ENST00000538834 B3GNT4Q9C0J1 378 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 RAB33BQ9H082 229 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 OR52A5Q9H2C5 316 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 SEMA6CQ9H3T2 930 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.43□□□□□ -0.26
CD9-208ENST00000538834 MARCH4Q9P2E8 410 aaPredicted RBP13.43□□□□□ -0.26
CD9-208ENST00000538834 ACSL6Q9UKU0 697 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 DNAJC16Q9Y2G8 782 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 CHD6Q8TD26 2715 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 MN1Q10571 1320 aaPredicted RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 MGAQ8IWI9 3026 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 A0A087WV48 116 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 GOLGA6L10A0A0M3HER8 536 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 ZCWPW2A0A1B0GU75 182 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 FAM237BA0A1B0GVD1 139 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 CCDC78A2IDD5 438 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 OR52A4PA6NMU1 304 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 SRRM3A6NNA2 597 aaPredicted RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 CFAP99D6REC4 459 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 CCDC188H7C350 402 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 DNALI1O14645 258 aaPredicted RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 HGSO14964 777 aaPredicted RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 ZW10O43264 779 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 BRINP1O60477 761 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 SNX2O60749 519 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 ALDH4A1P30038 563 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 CD151P48509 253 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 VPS41P49754 854 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 DRG2P55039 364 aaKnown RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 SESN2P58004 480 aaPredicted RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 RPA4Q13156 261 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 C16orf72Q14CZ0 275 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 ST3GAL2Q16842 350 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 TYSND1Q2T9J0 566 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 TBC1D25Q3MII6 688 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 KIAA0930Q6ICG6 404 aaPredicted RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 DET1Q7L5Y6 550 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 LSMEM2Q8N112 164 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 C17orf53Q8N3J3 647 aaPredicted RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 PPHLN1Q8NEY8 458 aaKnown RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 MFSD3Q96ES6 412 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 RMDN2Q96LZ7 410 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 ZNF578Q96N58 590 aaPredicted RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 FCRL3Q96P31 734 aaPredicted RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 INSM2Q96T92 566 aaPredicted RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 P2RY12Q9H244 342 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 OSGEPL1Q9H4B0 414 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 RDH14Q9HBH5 336 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 XAB2Q9HCS7 855 aaKnown RBP13.42□□□□□ -0.26
CD9-208ENST00000538834 KCNK4Q9NYG8 393 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 EPHA6Q9UF33 1036 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 SATB2Q9UPW6 733 aa13.42□□□□□ -0.26
CD9-208ENST00000538834 SLC5A10A0PJK1 596 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 MAGEB16A2A368 324 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 QSOX1O00391 747 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 OR1I1O60431 355 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 MPOP05164 745 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 MTHFD1P11586 935 aaKnown RBP13.41□□□□□ -0.26
CD9-208ENST00000538834 ACADLP28330 430 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 ADARP55265 1226 aaKnown RBP13.41□□□□□ -0.26
CD9-208ENST00000538834 SARNPP82979 210 aaKnown RBP13.41□□□□□ -0.26
CD9-208ENST00000538834 NKAIN2Q5VXU1 208 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 SYDE1Q6ZW31 735 aaPredicted RBP13.41□□□□□ -0.26
CD9-208ENST00000538834 USP53Q70EK8 1073 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 TAS2R42Q7RTR8 314 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 ZNF572Q7Z3I7 529 aaPredicted RBP13.41□□□□□ -0.26
CD9-208ENST00000538834 HOOK3Q86VS8 718 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 ZNF761Q86XN6 746 aaPredicted RBP13.41□□□□□ -0.26
CD9-208ENST00000538834 PPIL6Q8IXY8 311 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms