RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 C16orf46Q6P387 395 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 KYAT3Q6YP21 454 aaKnown RBP13.92□□□□□ -0.18
CD4-208ENST00000538827 OTOAQ7RTW8 1153 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 TAX1BP1Q86VP1 789 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 TMEFF1Q8IYR6 380 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 PLD6Q8N2A8 252 aaKnown RBP13.92□□□□□ -0.18
CD4-208ENST00000538827 SPATA6LQ8N4H0 392 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 TCP10LQ8TDR4 215 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 FAM111AQ96PZ2 611 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 PAIP2Q9BPZ3 127 aaKnown RBP13.92□□□□□ -0.18
CD4-208ENST00000538827 PCED1AQ9H1Q7 454 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 SSU72Q9NP77 194 aaKnown RBP13.92□□□□□ -0.18
CD4-208ENST00000538827 ZNF358Q9NW07 568 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 MED16Q9Y2X0 877 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 PRKAB1Q9Y478 270 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 CACNA1IQ9P0X4 2223 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 LRP4O75096 1905 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 A0A1W2PPC4 97 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 DCDC2BA2VCK2 349 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 SGTAO43765 313 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 TYROBPO43914 113 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 RPA3P35244 121 aaPredicted RBP13.91□□□□□ -0.18
CD4-208ENST00000538827 TRIM23P36406 574 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 RGS4P49798 205 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 DLG1Q12959 904 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 SRSF5Q13243 272 aaKnown RBP13.91□□□□□ -0.18
CD4-208ENST00000538827 TSNAXIP1Q2TAA8 658 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 AGAP9Q5VTM2 703 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 HHATQ5VTY9 493 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 LRRC8EQ6NSJ5 796 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 KLC3Q6P597 504 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 TMEM207Q6UWW9 146 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 MAMSTRQ6ZN01 415 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 CDHR3Q6ZTQ4 885 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 SH2D5Q6ZV89 423 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 LRRTM4Q86VH4 590 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 LONP2Q86WA8 852 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 MDM1Q8TC05 714 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 ANKRD49Q8WVL7 239 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 DYDC1Q8WWB3 177 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 INPP5DQ92835 1189 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 EXT2Q93063 718 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 COL26A1Q96A83 441 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 NXNL1Q96CM4 212 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 BMFQ96LC9 184 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 WDR92Q96MX6 357 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 CCM2Q9BSQ5 444 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 CNOT10Q9H9A5 744 aaKnown RBP13.91□□□□□ -0.18
CD4-208ENST00000538827 SYTL2Q9HCH5 934 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 OGFRQ9NZT2 677 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 SLC17A7Q9P2U7 560 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 DCDC2Q9UHG0 476 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 EIF2B4Q9UI10 523 aaKnown RBP13.91□□□□□ -0.18
CD4-208ENST00000538827 RUVBL2Q9Y230 463 aaKnown RBP13.91□□□□□ -0.18
CD4-208ENST00000538827 DHRS7Q9Y394 339 aa13.91□□□□□ -0.18
CD4-208ENST00000538827 NPEPPSL1A6NEC2 478 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 TMEM202A6NGA9 273 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 METTL12A8MUP2 240 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 C10orf142B7Z368 130 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 SCAMP1O15126 338 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 KLHL2O95198 593 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 ZWINTO95229 277 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 WISP3O95389 354 aaPredicted RBP13.9□□□□□ -0.18
CD4-208ENST00000538827 APOA4P06727 396 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 GSTA1P08263 222 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 TDGF1P13385 188 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 CHN1P15882 459 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 KELP23276 732 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 HTR1BP28222 390 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 HOXA6P31267 233 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 CCR7P32248 378 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 CRHR1P34998 444 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 SKIV2L2P42285 1042 aaKnown RBP13.9□□□□□ -0.18
CD4-208ENST00000538827 RABIFP47224 123 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 CSRP3P50461 194 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 GYS2P54840 703 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 IL2P60568 153 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 INSCQ1MX18 579 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 FAM83EQ2M2I3 478 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 ENPP7Q6UWV6 458 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 Q6ZSR6 202 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 PIWIL4Q7Z3Z4 852 aaKnown RBP13.9□□□□□ -0.18
CD4-208ENST00000538827 CCDC91Q7Z6B0 441 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 CLEC14AQ86T13 490 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 GALNT13Q8IUC8 556 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 RGL4Q8IZJ4 473 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 CENPLQ8N0S6 344 aaPredicted RBP13.9□□□□□ -0.18
CD4-208ENST00000538827 MYO1HQ8N1T3 1032 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 NKAPQ8N5F7 415 aaKnown RBP13.9□□□□□ -0.18
CD4-208ENST00000538827 TMEM145Q8NBT3 493 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 CADM4Q8NFZ8 388 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 OR13H1Q8NG92 308 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 SKA2Q8WVK7 121 aaPredicted RBP13.9□□□□□ -0.18
CD4-208ENST00000538827 ZNF514Q96K75 400 aaPredicted RBP13.9□□□□□ -0.18
CD4-208ENST00000538827 FGF22Q9HCT0 170 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 MRPL40Q9NQ50 206 aaKnown RBP13.9□□□□□ -0.18
CD4-208ENST00000538827 IGSF5Q9NSI5 407 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 TMEM216Q9P0N5 145 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 XPR1Q9UBH6 696 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 KLQ9UEF7 1012 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms