RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 CFAP20Q9Y6A4 193 aaKnown RBP14.67□□□□□ -0.06
RAB40B-202ENST00000538809 SPTBP11277 2137 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 LDB2O43679 373 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 LIASO43766 372 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 KIF1CO43896 1103 aaKnown RBP14.66□□□□□ -0.06
RAB40B-202ENST00000538809 RAD1O60671 282 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 RASSF9O75901 435 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 CRTAMO95727 393 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 CCDC175P0C221 793 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 LIFP15018 202 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 PPP1CAP62136 330 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 SEPT6Q14141 434 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 RPE65Q16518 533 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 LONRF2Q1L5Z9 754 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 IRGCQ6NXR0 463 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 CEACAM20Q6UY09 585 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 FAM92BQ6ZTR7 304 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 CACNA2D3Q8IZS8 1091 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 EXTL1Q92935 676 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 WBP1Q96G27 269 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 WWP1Q9H0M0 922 aa14.66□□□□□ -0.06
RAB40B-202ENST00000538809 IMP3Q9NV31 184 aaKnown RBP14.66□□□□□ -0.06
RAB40B-202ENST00000538809 SIDT1Q9NXL6 827 aaKnown RBP14.66□□□□□ -0.06
RAB40B-202ENST00000538809 CCDC78A2IDD5 438 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 SGTAO43765 313 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 AP2A1O95782 977 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 ANKRD34CP0C6C1 535 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 PRSS56P0CW18 603 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 TPH1P17752 444 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 ITGALP20701 1170 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 SH3BP2P78314 561 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 FOXM1Q08050 763 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 PLCL1Q15111 1095 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 P3H1Q32P28 736 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 LINC00303Q3SY05 128 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 XKR5Q6UX68 686 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 RBM12BQ8IXT5 1001 aaKnown RBP14.65□□□□□ -0.06
RAB40B-202ENST00000538809 LILRA3Q8N6C8 439 aaPredicted RBP14.65□□□□□ -0.06
RAB40B-202ENST00000538809 ZSCAN1Q8NBB4 408 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 LRRC45Q96CN5 670 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 TEFMQ96QE5 360 aaKnown RBP14.65□□□□□ -0.06
RAB40B-202ENST00000538809 FRMD8P1Q9BZ68 369 aaPredicted RBP14.65□□□□□ -0.06
RAB40B-202ENST00000538809 LRRC40Q9H9A6 602 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 LZTFL1Q9NQ48 299 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 FBXO8Q9NRD0 319 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 PILRAQ9UKJ1 303 aa14.65□□□□□ -0.06
RAB40B-202ENST00000538809 DNMT3AQ9Y6K1 912 aaPredicted RBP14.65□□□□□ -0.06
RAB40B-202ENST00000538809 ZNF462Q96JM2 2506 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 MGAT4DA6NG13 374 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 POLR1CO15160 346 aaPredicted RBP14.64□□□□□ -0.07
RAB40B-202ENST00000538809 KCNJ13O60928 360 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 STK17BO94768 372 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 MTHFD1P11586 935 aaKnown RBP14.64□□□□□ -0.07
RAB40B-202ENST00000538809 PSMA3P25788 255 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 STIP1P31948 543 aaKnown RBP14.64□□□□□ -0.07
RAB40B-202ENST00000538809 MC4RP32245 332 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 CDKN1CP49918 316 aaPredicted RBP14.64□□□□□ -0.07
RAB40B-202ENST00000538809 PDE1BQ01064 536 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 POU6F1Q14863 301 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 RPS6KA1Q15418 735 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 BCL7AQ4VC05 210 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 ZRANB3Q5FWF4 1079 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 CACHD1Q5VU97 1274 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 METRNLQ641Q3 311 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 TIPARPQ7Z3E1 657 aaKnown RBP14.64□□□□□ -0.07
RAB40B-202ENST00000538809 NXPE1Q8N323 547 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 SPDYE1Q8NFV5 336 aaPredicted RBP14.64□□□□□ -0.07
RAB40B-202ENST00000538809 OR2L2Q8NH16 312 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 ULK4Q96C45 1275 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 DCUN1D1Q96GG9 259 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 ZNF514Q96K75 400 aaPredicted RBP14.64□□□□□ -0.07
RAB40B-202ENST00000538809 RMDN2Q96LZ7 410 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 C12orf66Q96MD2 445 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 TLR10Q9BXR5 811 aa14.64□□□□□ -0.07
RAB40B-202ENST00000538809 ZNF768Q9H5H4 540 aaKnown RBP14.64□□□□□ -0.07
RAB40B-202ENST00000538809 TRBV5-4A0A0C4DH59 114 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 H7C0S8 307 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 POLBP06746 335 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 SLC35G4P0C7Q5 338 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 HADHAP40939 763 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 PRLHRP49683 370 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 PRSS42Q7Z5A4 293 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 SNX20Q7Z614 316 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 UNC5BQ8IZJ1 945 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 NLGN4XQ8N0W4 816 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 EXD3Q8N9H8 876 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 NLGN4YQ8NFZ3 816 aaPredicted RBP14.63□□□□□ -0.07
RAB40B-202ENST00000538809 C1orf54Q8WWF1 131 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 MED8Q96G25 268 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 ELMO2Q96JJ3 720 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 ALS2CR12Q96Q35 445 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 OR6C1Q96RD1 312 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 INSM2Q96T92 566 aaPredicted RBP14.63□□□□□ -0.07
RAB40B-202ENST00000538809 COPS8Q99627 209 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 ARHGAP9Q9BRR9 750 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 SLC12A9Q9BXP2 914 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 PPP2R2CQ9Y2T4 447 aa14.63□□□□□ -0.07
RAB40B-202ENST00000538809 IGLV3-16A0A075B6K0 115 aa14.62□□□□□ -0.07
RAB40B-202ENST00000538809 LOC101059948A0A1B0GTJ6 334 aa14.62□□□□□ -0.07
RAB40B-202ENST00000538809 PSMD3O43242 534 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms