RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 KPNA2P52292 529 aaKnown RBP12.28□□□□□ -0.44
USP3-203ENST00000538686 CDH6P55285 790 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 BCAR1P56945 870 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 CSNK2BP67870 215 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 CLDN10P78369 228 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 IRF9Q00978 393 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 IL5RAQ01344 420 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 MRPL28Q13084 256 aaKnown RBP12.28□□□□□ -0.44
USP3-203ENST00000538686 COL28A1Q2UY09 1125 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 ZACNQ401N2 412 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 GNASQ5JWF2 1037 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 LRRC71Q8N4P6 559 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 ZNF366Q8N895 744 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 C3orf58Q8NDZ4 430 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 ZNF680Q8NEM1 530 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 UBASH3BQ8TF42 649 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 TMEM125Q96AQ2 219 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 PDLIM5Q96HC4 596 aaKnown RBP12.28□□□□□ -0.44
USP3-203ENST00000538686 SERPINB11Q96P15 392 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 SEPHS2Q99611 448 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 PTTG3PQ9NZH4 202 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 ARHGAP28Q9P2N2 729 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 C2orf81A6NN90 581 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 FXYD1O00168 92 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 SNAPINO95295 136 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 TGM6O95932 706 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 TCF3P15923 654 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 GPX3P22352 226 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 CHMP24386 653 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 MIPP30301 263 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 CA5AP35218 305 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 MTHFRP42898 656 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 RECQLP46063 649 aaPredicted RBP12.28□□□□□ -0.44
USP3-203ENST00000538686 KCNC1P48547 511 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 RAB14P61106 215 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 CHRNB3Q05901 458 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 KIF19Q2TAC6 998 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 QRICH1Q2TAL8 776 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 TOR1AIP1Q5JTV8 583 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 C6orf132Q5T0Z8 1188 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 CFAP77Q6ZQR2 320 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 MAP4K3Q8IVH8 894 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 P3H2Q8IVL5 708 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 GPD1LQ8N335 351 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 OR5T2Q8NGG2 359 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 SYTL5Q8TDW5 730 aaPredicted RBP12.28□□□□□ -0.44
USP3-203ENST00000538686 CCDC126Q96EE4 140 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 C12orf57Q99622 126 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 LDAHQ9H6V9 325 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 MAGED2Q9UNF1 606 aaPredicted RBP12.28□□□□□ -0.44
USP3-203ENST00000538686 MFHAS1Q9Y4C4 1052 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 SESN1Q9Y6P5 492 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 PTPRJQ12913 1337 aa12.27□□□□□ -0.44
USP3-203ENST00000538686 NRAPQ86VF7 1730 aa12.27□□□□□ -0.44
USP3-203ENST00000538686 E2F8A0AVK6 867 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 FAM170BA6NMN3 283 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 B4DXG7 233 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 NR5A2O00482 541 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 XPNPEP2O43895 674 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 MATN4O95460 622 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 METTL18O95568 372 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 CD72P21854 359 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 SNRPD2P62316 118 aaKnown RBP12.27□□□□□ -0.45
USP3-203ENST00000538686 LIPEQ05469 1076 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 BTN1A1Q13410 526 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 HKDC1Q2TB90 917 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 TXNDC11Q6PKC3 985 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 TFAP2EQ6VUC0 442 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 MRPL10Q7Z7H8 261 aaKnown RBP12.27□□□□□ -0.45
USP3-203ENST00000538686 B3GNT8Q7Z7M8 397 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 GALNT10Q86SR1 603 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 FAM124AQ86V42 546 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 FUNDC1Q8IVP5 155 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 C9orf62Q8N4C0 152 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 TMEM151AQ8N4L1 468 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 PQLC3Q8N755 202 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 ZNF540Q8NDQ6 660 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 RBPMSQ93062 196 aaKnown RBP12.27□□□□□ -0.45
USP3-203ENST00000538686 SGK3Q96BR1 496 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 REPS1Q96D71 796 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 BEX2Q9BXY8 128 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 PRDM11Q9NQV5 511 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 ERVK13-1Q9NX77 482 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 NSMCE4AQ9NXX6 385 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 CDH9Q9ULB4 789 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 COPS3Q9UNS2 423 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 MRPL11Q9Y3B7 192 aaKnown RBP12.27□□□□□ -0.45
USP3-203ENST00000538686 SNX8Q9Y5X2 465 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 RGPD3A6NKT7 1758 aaPredicted RBP12.27□□□□□ -0.45
USP3-203ENST00000538686 RGPD4Q7Z3J3 1758 aa12.27□□□□□ -0.45
USP3-203ENST00000538686 ZFC3H1O60293 1989 aaKnown RBP12.27□□□□□ -0.45
USP3-203ENST00000538686 IGKV6D-41A0A0C4DH26 115 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 PROM1O43490 865 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 CHMP2AO43633 222 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 ERVK-10P10266 1014 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 NR2C2P49116 596 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 CCT3P49368 545 aaKnown RBP12.26□□□□□ -0.45
USP3-203ENST00000538686 SCNN1GP51170 649 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 HYAL2Q12891 473 aa12.26□□□□□ -0.45
USP3-203ENST00000538686 CAMK1Q14012 370 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms