RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TBL3Q12788 808 aaKnown RBP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 CYLC2Q14093 348 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 HABP4Q5JVS0 413 aaKnown RBP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 LIPIQ6XZB0 460 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 GPR149Q86SP6 731 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 MYLK4Q86YV6 388 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-205ENST00000538545 OR2T11Q8NH01 316 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 PIP4K2CQ8TBX8 421 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 SLC2A11Q9BYW1 496 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 TRIM8Q9BZR9 551 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 ZFP14Q9HCL3 533 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 POLG2Q9UHN1 485 aa13.9□□□□□ -0.18
ACTN1-205ENST00000538545 LAMA1P25391 3075 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 CCDC85CA6NKD9 419 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 MMP20O60882 483 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 NFATC1O95644 943 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 RPS3P23396 243 aaKnown RBP eCLIP13.89□□□□□ -0.196e-7■■□□□ 13.4
ACTN1-205ENST00000538545 TBCCQ15814 346 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 GPR33Q49SQ1 333 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 C1orf146Q5VVC0 180 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 MACC1Q6ZN28 852 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 TTC1Q99614 292 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 SPATS2LQ9NUQ6 558 aaKnown RBP13.89□□□□□ -0.19
ACTN1-205ENST00000538545 PKD2L2Q9NZM6 624 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 GMPR2Q9P2T1 348 aaKnown RBP13.89□□□□□ -0.19
ACTN1-205ENST00000538545 SLC8A2Q9UPR5 921 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 MYO10Q9HD67 2058 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 ZFC3H1O60293 1989 aaKnown RBP13.89□□□□□ -0.19
ACTN1-205ENST00000538545 SGTAO43765 313 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 EPHX1P07099 455 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 TCF3P15923 654 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 RCN1Q15293 331 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 EGFLAMQ63HQ2 1017 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 KANK2Q63ZY3 851 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 GOLGA7Q7Z5G4 137 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 TERB1Q8NA31 727 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 LRCH3Q96II8 777 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 CCDC28BQ9BUN5 200 aa13.89□□□□□ -0.19
ACTN1-205ENST00000538545 FARSBQ9NSD9 589 aaKnown RBP13.89□□□□□ -0.19
ACTN1-205ENST00000538545 KLK8O60259 260 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 HGFP14210 728 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 ATP1B2P14415 290 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-205ENST00000538545 GDI1P31150 447 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 PREPP48147 710 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 SEC13P55735 322 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 GALNT1Q10472 559 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-205ENST00000538545 FASTKQ14296 549 aaKnown RBP13.88□□□□□ -0.19
ACTN1-205ENST00000538545 KIF19Q2TAC6 998 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 DSELQ8IZU8 1212 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 ZNF483Q8TF39 744 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-205ENST00000538545 ATP6V1E2Q96A05 226 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 TEX37Q96LM6 180 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 FAM129BQ96TA1 746 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 TMEM79Q9BSE2 394 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 TRMOQ9BU70 441 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 IL1RL2Q9HB29 575 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 MSRAQ9UJ68 235 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 COL4A3Q01955 1670 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-205ENST00000538545 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-205ENST00000538545 OR7A17O14581 309 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 CAPN1P07384 714 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 DGKAP23743 735 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 MMP12P39900 470 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 RUNX3Q13761 415 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 OR4F6Q8NGB9 312 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 AP2M1Q96CW1 435 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 MTFMTQ96DP5 389 aaKnown RBP13.88□□□□□ -0.19
ACTN1-205ENST00000538545 RNPEPL1Q9HAU8 725 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 SLC27A6Q9Y2P4 619 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 PRKAB1Q9Y478 270 aa13.88□□□□□ -0.19
ACTN1-205ENST00000538545 NUP214P35658 2090 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-205ENST00000538545 FBP2O00757 339 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 RGS4P49798 205 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 HK2P52789 917 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 HNRNPA1L2Q32P51 320 aaKnown RBP13.87□□□□□ -0.19
ACTN1-205ENST00000538545 DNAL1Q4LDG9 190 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 SGO1Q5FBB7 561 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 HENMT1Q5T8I9 393 aaKnown RBP13.87□□□□□ -0.19
ACTN1-205ENST00000538545 FBXL19Q6PCT2 694 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 PHYKPLQ8IUZ5 450 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 FUNDC1Q8IVP5 155 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 PYDC1Q8WXC3 89 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 CDRT15Q96T59 188 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 FAM126AQ9BYI3 521 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-205ENST00000538545 IPPKQ9H8X2 491 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 WWOXQ9NZC7 414 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 ZNHIT2Q9UHR6 403 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 PSMD12O00232 456 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-205ENST00000538545 TBX10O75333 385 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 ANP32DO95626 131 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 CYP2A6P11509 494 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-205ENST00000538545 PSMD8P48556 350 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 INHBCP55103 352 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 GTF2H2Q13888 395 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 CRY1Q16526 586 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 CCSMST1Q4G0I0 132 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 GTF2H2CQ6P1K8 395 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 CHSY3Q70JA7 882 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 ADAMTSL2Q86TH1 951 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms