RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SMARCB1Q12824 385 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 RFTN1Q14699 578 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 OGFOD2Q6N063 350 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 VSTM1Q6UX27 236 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 UBE2R2Q712K3 238 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 PLEKHH3Q7Z736 793 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CMC1Q7Z7K0 106 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 SLC37A3Q8NCC5 494 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 THAP6Q8TBB0 222 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 FAM163AQ96GL9 167 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 ZNF354BQ96LW1 612 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 AIF1LQ9BQI0 150 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 DUSP16Q9BY84 665 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 TFB2MQ9H5Q4 396 aaKnown RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 ZNF696Q9H7X3 374 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 PTPRJQ12913 1337 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 BCAS2O75934 225 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 PRH1P02810 166 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 TACSTD2P09758 323 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 RXRBP28702 533 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 RORAP35398 523 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CXCR3P49682 368 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 KHKP50053 298 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 NDUFA9Q16795 377 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ZC3H12AQ5D1E8 599 aaKnown RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 IDNKQ5T6J7 187 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 XYLT1Q86Y38 959 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 HDDC3Q8N4P3 179 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 OXR1Q8N573 874 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CXorf40AQ8TE69 158 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 RIT1Q92963 219 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CNDP2Q96KP4 475 aaKnown RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 PPM1MQ96MI6 270 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 PSKH2Q96QS6 385 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CCDC32Q9BV29 185 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ACTR6Q9GZN1 396 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 TCF7L1Q9HCS4 588 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 SNTG1Q9NSN8 517 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 FBXO9Q9UK97 447 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 U3KQV3 271 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ANXA2P2A6NMY6 339 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 L7N2F9 121 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 GTPBP1O00178 669 aaKnown RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 ITM2AO43736 263 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 OR10H2O60403 315 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 MAFO75444 373 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 KDM4BO94953 1096 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ANXA2P07355 339 aaKnown RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 MAGP20916 626 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 PTPN9P43378 593 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CCR4P51679 360 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 GBX2P52951 348 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 ERVK-8P63133 956 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 PRAMEF17Q5VTA0 474 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 IL23RQ5VWK5 629 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ZNF367Q7RTV3 350 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 SPERTQ8NA61 448 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 HAS1Q92839 578 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ISOC1Q96CN7 298 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 PWWP2AQ96N64 755 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 TPK1Q9H3S4 243 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ST6GALNAC4Q9H4F1 302 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 SYNDIG1Q9H7V2 258 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CHMP1AQ9HD42 196 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 TRPV2Q9Y5S1 764 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 COL1A2P08123 1366 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 LOC100130705A0A1B0GUX0 176 aa6.84□□□□□ -1.32
SORT1-209ENST00000538502 C2orf71A6NGG8 1288 aa6.84□□□□□ -1.32
SORT1-209ENST00000538502 XKRYO14609 159 aa6.84□□□□□ -1.32
SORT1-209ENST00000538502 C8GP07360 202 aa6.84□□□□□ -1.32
SORT1-209ENST00000538502 PABPC4LP0CB38 370 aaKnown RBP6.84□□□□□ -1.32
SORT1-209ENST00000538502 SHMT1P34896 483 aa6.84□□□□□ -1.32
SORT1-209ENST00000538502 APLP1P51693 650 aa6.84□□□□□ -1.32
SORT1-209ENST00000538502 CSTF1Q05048 431 aaKnown RBP6.84□□□□□ -1.32
SORT1-209ENST00000538502 FADDQ13158 208 aa6.84□□□□□ -1.32
SORT1-209ENST00000538502 GRHL2Q6ISB3 625 aa6.84□□□□□ -1.32
SORT1-209ENST00000538502 RALGPS2Q86X27 583 aaPredicted RBP6.84□□□□□ -1.32
SORT1-209ENST00000538502 SAMD14Q8IZD0 417 aaPredicted RBP6.84□□□□□ -1.32
SORT1-209ENST00000538502 SLC13A3Q8WWT9 602 aa6.84□□□□□ -1.32
SORT1-209ENST00000538502 ELMO3Q96BJ8 720 aa6.84□□□□□ -1.32
SORT1-209ENST00000538502 CDADC1Q9BWV3 514 aa6.84□□□□□ -1.32
SORT1-209ENST00000538502 CUEDC1Q9NWM3 386 aaPredicted RBP6.84□□□□□ -1.32
SORT1-209ENST00000538502 H3BSA7 217 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 DFNA5O60443 496 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 NME6O75414 186 aaPredicted RBP6.83□□□□□ -1.32
SORT1-209ENST00000538502 SCGNO76038 276 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 PET100P0DJ07 73 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 FCGRTP55899 365 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 WNT3AP56704 352 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 SREBF2Q12772 1141 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 MFSD10Q14728 455 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 HAGHLQ6PII5 290 aaPredicted RBP6.83□□□□□ -1.32
SORT1-209ENST00000538502 LCLAT1Q6UWP7 414 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 TIFABQ6ZNK6 161 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 ZNF767PQ75MW2 155 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 TRAPPC5Q8IUR0 188 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 SEMA3CQ99985 751 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 FEM1AQ9BSK4 669 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 GDAP2Q9NXN4 497 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms