RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 NR6A1Q15406 480 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 CYP51A1Q16850 503 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 PLA2G4EQ3MJ16 856 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 NANOGP8Q6NSW7 305 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 SLC39A11Q8N1S5 342 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 NANOGQ9H9S0 305 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 HNRNPRO43390 633 aaKnown RBP24.53■■□□□ 1.52
RAB40C-204ENST00000538492 G6PDP11413 515 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 ABRAXAS2Q15018 415 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 RBM44Q6ZP01 1051 aaKnown RBP24.53■■□□□ 1.52
RAB40C-204ENST00000538492 SNX20Q7Z614 316 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 ADGRG5Q8IZF4 528 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 RBFAQ8N0V3 343 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 CBR4Q8N4T8 237 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 ELOVL2Q9NXB9 296 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 ZIM2Q9NZV7 527 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 PCDH10Q9P2E7 1040 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 GNPTGQ9UJJ9 305 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 TNPO3Q9Y5L0 923 aaKnown RBP24.53■■□□□ 1.52
RAB40C-204ENST00000538492 COL4A6Q14031 1691 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 FAM234BA2RU67 622 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 PLOD2O00469 737 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 RAD51BO15315 384 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 CKMP06732 381 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 BPIP17213 487 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 CA8P35219 290 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 MRPL19P49406 292 aaKnown RBP24.52■■□□□ 1.52
RAB40C-204ENST00000538492 TXNL4AP83876 142 aaKnown RBP24.52■■□□□ 1.52
RAB40C-204ENST00000538492 PHKG1Q16816 387 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 SLC5A9Q2M3M2 681 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 CARM1Q86X55 608 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 NCSTNQ92542 709 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 EGFL8Q99944 293 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 AGPAT4Q9NRZ5 378 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 DUS2Q9NX74 493 aaKnown RBP24.52■■□□□ 1.52
RAB40C-204ENST00000538492 OBSL1O75147 1896 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 BNIP3LO60238 219 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 ITGALP20701 1170 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 GABRR2P28476 465 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 PIK3CGP48736 1102 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 PLOD1Q02809 727 aaPredicted RBP24.52■■□□□ 1.52
RAB40C-204ENST00000538492 PRKG2Q13237 762 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 IRAK1BP1Q5VVH5 260 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 PPP4R4Q6NUP7 873 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 EPHX4Q8IUS5 362 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 BBS7Q8IWZ6 715 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 REM2Q8IYK8 340 aaPredicted RBP24.52■■□□□ 1.52
RAB40C-204ENST00000538492 CRLS1Q9UJA2 301 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 ST14Q9Y5Y6 855 aa24.52■■□□□ 1.52
RAB40C-204ENST00000538492 TAPBPO15533 448 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 PLIN5Q00G26 463 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 CHRNA6Q15825 494 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 TSPAN33Q86UF1 283 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 ZSWIM9Q86XI8 627 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 TCEAL8Q8IYN2 117 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 CMTR2Q8IYT2 770 aaKnown RBP24.51■■□□□ 1.51
RAB40C-204ENST00000538492 GRIN3AQ8TCU5 1115 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 ZFAND2BQ8WV99 257 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 CCT7Q99832 543 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 MRPL17Q9NRX2 175 aaKnown RBP24.51■■□□□ 1.51
RAB40C-204ENST00000538492 V9GYQ6 96 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 GLYATL1P3A0A0U1RQE8 302 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 CCDC160A6NGH7 325 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 LSM1O15116 133 aaKnown RBP24.51■■□□□ 1.51
RAB40C-204ENST00000538492 FASP25445 335 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 ACRV1P26436 265 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 LMAN2Q12907 356 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 RFTN2Q52LD8 501 aaPredicted RBP24.51■■□□□ 1.51
RAB40C-204ENST00000538492 KRT80Q6KB66 452 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 MILR1Q7Z6M3 343 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 ZFAND4Q86XD8 727 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 ABCG8Q9H221 673 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 CFAP97Q9P2B7 532 aa24.51■■□□□ 1.51
RAB40C-204ENST00000538492 POLR3HQ9Y535 204 aaPredicted RBP24.51■■□□□ 1.51
RAB40C-204ENST00000538492 HMOX2P30519 316 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 CD70P32970 193 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 RGS4P49798 205 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 TLE2Q04725 743 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 TRAF3Q13114 568 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 APOFQ13790 326 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 AP5B1Q2VPB7 878 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 NHSL2Q5HYW2 709 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 FAM126AQ9BYI3 521 aaPredicted RBP24.5■■□□□ 1.51
RAB40C-204ENST00000538492 EPB41L1Q9H4G0 881 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 ACTL8Q9H568 366 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 TLR9Q9NR96 1032 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 NDUFA13Q9P0J0 144 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 TRIM17Q9Y577 477 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 SCN8AQ9UQD0 1980 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 FFAR3O14843 346 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 GPR42O15529 346 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 OLFM2O95897 454 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 OTCP00480 354 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 RPS3P23396 243 aaKnown RBP eCLIP24.5■■□□□ 1.51
RAB40C-204ENST00000538492 DGKQP52824 942 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 CDKN3Q16667 212 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 DGKKQ5KSL6 1271 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 CYP20A1Q6UW02 462 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 GAREM2Q75VX8 874 aa24.5■■□□□ 1.51
RAB40C-204ENST00000538492 RALGPS2Q86X27 583 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms